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  5. AT1G28160

AT1G28160


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000007 (SeedPlants) Phylogenetic Tree(s): OG_06_0000007_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G28160
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00135920 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00006p00266920 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.03 Archaeplastida
AMTR_s00010p00240320 evm_27.TU.AmTr_v1... Ethylene-responsive transcription factor FZP OS=Oryza... 0.03 Archaeplastida
AMTR_s00016p00238800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00021p00184450 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00034p00206140 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00040p00180260 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00040p00196580 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00058p00066390 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.02 Archaeplastida
AMTR_s00115p00032780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AT1G21910 DREB26 Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT1G22190 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT1G22810 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT1G33760 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT1G75490 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT1G77200 No alias Integrase-type DNA-binding superfamily protein 0.05 Archaeplastida
AT1G77640 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT2G20880 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT2G22200 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT2G36450 HRD Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT2G47520 HRE2 Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT3G25890 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT3G50260 DEAR1, CEJ1, ATERF#011 cooperatively regulated by ethylene and jasmonate 1 0.08 Archaeplastida
AT4G17490 ERF-6-6, ERF6, ATERF6 ethylene responsive element binding factor 6 0.03 Archaeplastida
AT5G11190 SHN3 Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT5G13910 LEP Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT5G19790 RAP2.11 related to AP2 11 0.06 Archaeplastida
AT5G43410 No alias Integrase-type DNA-binding superfamily protein 0.07 Archaeplastida
AT5G51190 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT5G64750 ABR1 Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
GSVIVT01001089001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 Archaeplastida
GSVIVT01002195001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01002262001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01008649001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 Archaeplastida
GSVIVT01013916001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01013924001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01014291001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.06 Archaeplastida
GSVIVT01015037001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01017315001 No alias Cell wall.cutin and suberin.biosynthesis... 0.03 Archaeplastida
GSVIVT01018270001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01018271001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01018272001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.06 Archaeplastida
GSVIVT01019860001 No alias External stimuli response.temperature.ICE-CBF cold... 0.04 Archaeplastida
GSVIVT01021060001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01022076001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01027770001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01028050001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01028314001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01031388001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01032961001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01035911001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
Gb_03783 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_07476 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_12583 No alias transcription factor (DREB) 0.04 Archaeplastida
Gb_24321 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_24326 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_24328 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_24329 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_24891 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_26662 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_32995 No alias Ethylene-responsive transcription factor ERF016... 0.02 Archaeplastida
Gb_41020 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_41433 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_41836 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os01g10370.1 No alias transcription factor (DREB) 0.02 Archaeplastida
LOC_Os01g21120.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os02g10760.1 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.04 Archaeplastida
LOC_Os02g13710.1 No alias transcription factor (DREB) 0.06 Archaeplastida
LOC_Os02g32040.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os02g43970.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os02g55380.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os03g08460.1 No alias Ethylene-responsive transcription factor ERF073... 0.02 Archaeplastida
LOC_Os03g08470.1 No alias Ethylene-responsive transcription factor 1 OS=Oryza... 0.04 Archaeplastida
LOC_Os03g64260.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os05g28350.1 No alias transcription factor (DREB) 0.04 Archaeplastida
LOC_Os05g49010.1 No alias transcription factor (ERF) 0.04 Archaeplastida
LOC_Os06g08340.1 No alias transcription factor (ERF) 0.04 Archaeplastida
LOC_Os06g36000.1 No alias transcription factor (DREB) 0.04 Archaeplastida
LOC_Os06g40150.1 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.03 Archaeplastida
LOC_Os07g22730.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g47790.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os08g07700.1 No alias Ethylene-responsive transcription factor ERF087... 0.04 Archaeplastida
LOC_Os08g35240.1 No alias Ethylene-responsive transcription factor ERF017... 0.03 Archaeplastida
LOC_Os08g41030.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os09g11480.2 No alias Ethylene-responsive transcription factor ERF112... 0.02 Archaeplastida
LOC_Os10g41330.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os11g06770.2 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os11g13840.1 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_10266433g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_10343854g0010 No alias transcription factor (DREB) 0.05 Archaeplastida
MA_10430231g0010 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.02 Archaeplastida
MA_10434101g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_10434489g0020 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_108992g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_120531g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_132427g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_134453g0010 No alias transcription factor (DREB) 0.04 Archaeplastida
MA_15251g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_164803g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_17001g0020 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_201698g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_2040g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_214532g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_23271g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_269802g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_288689g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_367366g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_40048g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_4072g0020 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_411387g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_4182g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_426919g0030 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_428433g0010 No alias transcription factor (DREB) 0.04 Archaeplastida
MA_45733g0020 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_463250g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_500288g0010 No alias transcription factor (DREB) 0.04 Archaeplastida
MA_5280013g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_5306433g0010 No alias Ethylene-responsive transcription factor ERF017... 0.02 Archaeplastida
MA_54341g0010 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.03 Archaeplastida
MA_55226g0020 No alias Ethylene-responsive transcription factor ERF016... 0.03 Archaeplastida
MA_5629699g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_81979g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_82481g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_8574268g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_94228g0010 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.03 Archaeplastida
MA_9588449g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp4g00380.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c10_7030V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c16_13260V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c16_13280V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c1_7740V3.1 No alias ethylene responsive element binding factor 1 0.02 Archaeplastida
Pp3c21_13130V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c27_6030V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c4_23930V3.1 No alias ethylene responsive element binding factor 1 0.03 Archaeplastida
Pp3c5_810V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c6_16660V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c6_20480V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c7_20200V3.1 No alias ethylene responsive element binding factor 2 0.02 Archaeplastida
Smo104980 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
Solyc01g005630.3.1 No alias transcription factor (ERF). transcription factor (ERN1) 0.03 Archaeplastida
Solyc01g090345.1.1 No alias Ethylene-responsive transcription factor 13... 0.05 Archaeplastida
Solyc01g090370.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc01g090560.4.1 No alias transcription factor (DREB) 0.02 Archaeplastida
Solyc01g091760.3.1 No alias transcription factor (ERF). transcription factor (ERN1) 0.03 Archaeplastida
Solyc03g026280.3.1 No alias transcription factor (DREB). transcription factor (CBF/DREB1) 0.04 Archaeplastida
Solyc03g093550.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc03g124110.2.1 No alias transcription factor (DREB). transcription factor (CBF/DREB1) 0.03 Archaeplastida
Solyc04g007170.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc04g012050.3.1 No alias transcription factor (ERF) 0.06 Archaeplastida
Solyc04g072300.1.1 No alias Ethylene-responsive transcription factor FZP OS=Oryza... 0.03 Archaeplastida
Solyc04g080910.1.1 No alias transcription factor (DREB) 0.04 Archaeplastida
Solyc05g050790.3.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc05g051200.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc06g035700.1.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc06g065820.3.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc06g068360.3.1 No alias transcription factor (ERF) 0.05 Archaeplastida
Solyc06g068830.2.1 No alias transcription factor (ERF) 0.06 Archaeplastida
Solyc07g053740.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc09g091950.1.1 No alias transcription factor (DREB) 0.04 Archaeplastida
Solyc10g006130.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc10g078610.1.1 No alias transcription factor (ERF). transcription factor (ERN1) 0.03 Archaeplastida
Solyc11g011750.1.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Zm00001e000611_P001 No alias Ethylene-responsive transcription factor ERF073... 0.02 Archaeplastida
Zm00001e000689_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e003579_P001 No alias Ethylene-responsive transcription factor ERF015... 0.03 Archaeplastida
Zm00001e003800_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e006982_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e007205_P001 No alias Dehydration-responsive element-binding protein 1E... 0.02 Archaeplastida
Zm00001e007350_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e007351_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e009947_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e010860_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e015312_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e015430_P001 No alias Dehydration-responsive element-binding protein 1G... 0.02 Archaeplastida
Zm00001e015968_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e017516_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e019837_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e023686_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e023759_P001 No alias Ethylene-responsive transcription factor ERF017... 0.03 Archaeplastida
Zm00001e023804_P001 No alias Ethylene-responsive transcription factor ERF013... 0.04 Archaeplastida
Zm00001e026192_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e030585_P001 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.04 Archaeplastida
Zm00001e031497_P001 No alias Ethylene-responsive transcription factor ABI4 OS=Oryza... 0.03 Archaeplastida
Zm00001e032033_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e034661_P001 No alias Ethylene-responsive transcription factor ERF115... 0.02 Archaeplastida
Zm00001e034741_P001 No alias transcription factor (ERF). transcription factor (ERN1) 0.03 Archaeplastida
Zm00001e036401_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e037404_P001 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.04 Archaeplastida
Zm00001e037869_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e038525_P001 No alias Ethylene-responsive transcription factor ERF013... 0.03 Archaeplastida
Zm00001e039555_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e040124_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e041532_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e041539_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e041620_P002 No alias transcription factor (ERF) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity TAS Interproscan
CC GO:0005634 nucleus ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated ISS Interproscan
BP GO:0009873 ethylene-activated signaling pathway TAS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0002679 respiratory burst involved in defense response IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004033 aldo-keto reductase (NADP) activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004737 pyruvate decarboxylase activity IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006863 purine nucleobase transport IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0009741 response to brassinosteroid IEP Neighborhood
CC GO:0009986 cell surface IEP Neighborhood
MF GO:0010294 abscisic acid glucosyltransferase activity IEP Neighborhood
BP GO:0010411 xyloglucan metabolic process IEP Neighborhood
BP GO:0010541 acropetal auxin transport IEP Neighborhood
MF GO:0015105 arsenite transmembrane transporter activity IEP Neighborhood
BP GO:0015700 arsenite transport IEP Neighborhood
BP GO:0015851 nucleobase transport IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0043090 amino acid import IEP Neighborhood
BP GO:0045730 respiratory burst IEP Neighborhood
BP GO:0048527 lateral root development IEP Neighborhood
BP GO:0048528 post-embryonic root development IEP Neighborhood
BP GO:0090696 post-embryonic plant organ development IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 38 87
No external refs found!