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  5. LOC_Os01g01870.1

LOC_Os01g01870.1


Description : no hits & (original description: none)


Gene families : OG0001232 (Archaeplastida) Phylogenetic Tree(s): OG0001232_tree ,
OG_05_0000765 (LandPlants) Phylogenetic Tree(s): OG_05_0000765_tree ,
OG_06_0004627 (SeedPlants) Phylogenetic Tree(s): OG_06_0004627_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g01870.1
Cluster HCCA: Cluster_291

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00269070 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00038p00168930 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00068p00166340 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AT1G62975 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Archaeplastida
AT4G25400 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT4G25410 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
GSVIVT01020561001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
Gb_26735 No alias transcription factor (bHLH) 0.03 Archaeplastida
Gb_26737 No alias transcription factor (bHLH) 0.04 Archaeplastida
MA_10290037g0010 No alias transcription factor (bHLH) 0.04 Archaeplastida
MA_290659g0010 No alias transcription factor (bHLH) 0.04 Archaeplastida
Solyc02g078130.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc03g114230.2.1 No alias Transcription factor bHLH162 OS=Arabidopsis thaliana... 0.12 Archaeplastida
Zm00001e017131_P002 No alias transcription factor (bHLH) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 38 108
No external refs found!