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  5. LOC_Os01g01890.1

LOC_Os01g01890.1


Description : no hits & (original description: none)


Gene families : OG0000477 (Archaeplastida) Phylogenetic Tree(s): OG0000477_tree ,
OG_05_0008044 (LandPlants) Phylogenetic Tree(s): OG_05_0008044_tree ,
OG_06_0004536 (SeedPlants) Phylogenetic Tree(s): OG_06_0004536_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g01890.1
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00263800 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00058p00171710 evm_27.TU.AmTr_v1... No description available 0.25 Archaeplastida
AMTR_s00077p00183470 evm_27.TU.AmTr_v1... No description available 0.17 Archaeplastida
AT1G23790 No alias Plant protein of unknown function (DUF936) 0.19 Archaeplastida
AT3G14170 No alias Plant protein of unknown function (DUF936) 0.03 Archaeplastida
AT4G13370 No alias Plant protein of unknown function (DUF936) 0.16 Archaeplastida
GSVIVT01015437001 No alias No description available 0.34 Archaeplastida
GSVIVT01020241001 No alias No description available 0.31 Archaeplastida
Gb_19647 No alias regulatory protein (CORD) of cortical microtubule organisation 0.01 Archaeplastida
Gb_37688 No alias regulatory protein (CORD) of cortical microtubule organisation 0.16 Archaeplastida
Gb_38624 No alias regulatory protein (CORD) of cortical microtubule organisation 0.15 Archaeplastida
MA_134781g0010 No alias regulatory protein (CORD) of cortical microtubule organisation 0.2 Archaeplastida
MA_7104g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_8827g0010 No alias regulatory protein (CORD) of cortical microtubule organisation 0.14 Archaeplastida
MA_88653g0010 No alias regulatory protein (CORD) of cortical microtubule organisation 0.03 Archaeplastida
Mp5g18740.1 No alias regulatory protein (CORD) of cortical microtubule organisation 0.03 Archaeplastida
Pp3c11_800V3.1 No alias Plant protein of unknown function (DUF936) 0.03 Archaeplastida
Pp3c2_28590V3.1 No alias Plant protein of unknown function (DUF936) 0.02 Archaeplastida
Pp3c2_3720V3.1 No alias Plant protein of unknown function (DUF936) 0.02 Archaeplastida
Pp3c7_26930V3.1 No alias Plant protein of unknown function (DUF936) 0.02 Archaeplastida
Smo84972 No alias No description available 0.02 Archaeplastida
Solyc05g005580.3.1 No alias regulatory protein (CORD) of cortical microtubule organisation 0.26 Archaeplastida
Solyc12g007020.2.1 No alias regulatory protein (CORD) of cortical microtubule organisation 0.31 Archaeplastida
Zm00001e003729_P002 No alias regulatory protein (CORD) of cortical microtubule organisation 0.02 Archaeplastida
Zm00001e017128_P002 No alias regulatory protein (CORD) of cortical microtubule organisation 0.21 Archaeplastida
Zm00001e024007_P001 No alias regulatory protein (CORD) of cortical microtubule organisation 0.2 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
CC GO:0000775 chromosome, centromeric region IEP Neighborhood
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006270 DNA replication initiation IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
BP GO:0007059 chromosome segregation IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0045132 meiotic chromosome segregation IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
CC GO:0098687 chromosomal region IEP Neighborhood
BP GO:0098813 nuclear chromosome segregation IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903046 meiotic cell cycle process IEP Neighborhood
InterPro domains Description Start Stop
IPR010341 DUF936_pln 143 197
IPR010341 DUF936_pln 1 74
No external refs found!