LOC_Os01g04280.1


Description : Calmodulin-binding protein 60 B OS=Arabidopsis thaliana (sp|q9fkl6|cb60b_arath : 320.0)


Gene families : OG0000559 (Archaeplastida) Phylogenetic Tree(s): OG0000559_tree ,
OG_05_0009842 (LandPlants) Phylogenetic Tree(s): OG_05_0009842_tree ,
OG_06_0008072 (SeedPlants) Phylogenetic Tree(s): OG_06_0008072_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g04280.1
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00092720 evm_27.TU.AmTr_v1... Calmodulin-binding protein 60 B OS=Arabidopsis thaliana 0.06 Archaeplastida
AT1G73805 No alias Calmodulin binding protein-like 0.07 Archaeplastida
AT4G31000 No alias Calmodulin-binding protein 0.03 Archaeplastida
AT5G26920 CBP60G Cam-binding protein 60-like G 0.06 Archaeplastida
AT5G62570 No alias Calmodulin binding protein-like 0.06 Archaeplastida
GSVIVT01003722001 No alias Calmodulin-binding protein 60 E OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01008322001 No alias Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana 0.1 Archaeplastida
GSVIVT01008324001 No alias Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana 0.07 Archaeplastida
GSVIVT01031210001 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana 0.05 Archaeplastida
Gb_39213 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_18754g0010 No alias Calmodulin-binding protein 60 D OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_23963g0010 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc01g100240.3.1 No alias Calmodulin-binding protein 60 C OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc03g113980.3.1 No alias Calmodulin-binding protein 60 A OS=Arabidopsis thaliana... 0.07 Archaeplastida
Solyc03g119250.4.1 No alias Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc10g009210.4.1 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc12g036390.2.1 No alias Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana... 0.09 Archaeplastida
Zm00001e001388_P002 No alias Calmodulin-binding protein 60 D OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e016998_P001 No alias Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana... 0.08 Archaeplastida
Zm00001e038367_P001 No alias Calmodulin-binding protein 60 D OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e039693_P002 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
BP GO:0000097 sulfur amino acid biosynthetic process IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006534 cysteine metabolic process IEP Neighborhood
BP GO:0006535 cysteine biosynthetic process from serine IEP Neighborhood
BP GO:0006563 L-serine metabolic process IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
MF GO:0009001 serine O-acetyltransferase activity IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0009070 serine family amino acid biosynthetic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
MF GO:0009916 alternative oxidase activity IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
MF GO:0016412 serine O-acyltransferase activity IEP Neighborhood
MF GO:0016413 O-acetyltransferase activity IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019344 cysteine biosynthetic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR012416 CBP60 85 372
No external refs found!