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  5. LOC_Os01g04730.1

LOC_Os01g04730.1


Description : component RPL26 of LSU proteome component


Gene families : OG0002117 (Archaeplastida) Phylogenetic Tree(s): OG0002117_tree ,
OG_05_0002108 (LandPlants) Phylogenetic Tree(s): OG_05_0002108_tree ,
OG_06_0002767 (SeedPlants) Phylogenetic Tree(s): OG_06_0002767_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g04730.1
Cluster HCCA: Cluster_333

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00088770 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 Archaeplastida
AT3G49910 No alias Translation protein SH3-like family protein 0.07 Archaeplastida
AT5G67510 No alias Translation protein SH3-like family protein 0.11 Archaeplastida
Cpa|evm.model.tig00000144.60 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 Archaeplastida
Cre01.g040000 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 Archaeplastida
GSVIVT01030972001 No alias 60S ribosomal protein L26-1 OS=Arabidopsis thaliana 0.06 Archaeplastida
Gb_05675 No alias component RPL26 of LSU proteome component 0.04 Archaeplastida
Gb_06102 No alias component RPL26 of LSU proteome component 0.05 Archaeplastida
MA_13141g0010 No alias component RPL26 of LSU proteome component 0.08 Archaeplastida
MA_158811g0010 No alias component RPL26 of LSU proteome component 0.07 Archaeplastida
Mp2g12870.1 No alias component RPL26 of LSU proteome component 0.09 Archaeplastida
Pp3c10_11120V3.1 No alias Translation protein SH3-like family protein 0.05 Archaeplastida
Pp3c14_25170V3.1 No alias Translation protein SH3-like family protein 0.1 Archaeplastida
Pp3c1_25000V3.1 No alias Translation protein SH3-like family protein 0.04 Archaeplastida
Pp3c2_15910V3.1 No alias Translation protein SH3-like family protein 0.05 Archaeplastida
Pp3c4_17780V3.1 No alias Translation protein SH3-like family protein 0.05 Archaeplastida
Smo227399 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 Archaeplastida
Solyc02g064670.1.1 No alias component RPL26 of LSU proteome component 0.04 Archaeplastida
Solyc02g092430.1.1 No alias component RPL26 of LSU proteome component 0.08 Archaeplastida
Solyc03g044000.1.1 No alias component RPL26 of LSU proteome component 0.06 Archaeplastida
Zm00001e016957_P001 No alias component RPL26 of LSU proteome component 0.09 Archaeplastida
Zm00001e025774_P001 No alias component RPL26 of LSU proteome component 0.1 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
CC GO:0015934 large ribosomal subunit IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003713 transcription coactivator activity IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
MF GO:0008097 5S rRNA binding IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
CC GO:0031248 protein acetyltransferase complex IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
CC GO:0043189 H4/H2A histone acetyltransferase complex IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
CC GO:1902493 acetyltransferase complex IEP Neighborhood
CC GO:1902562 H4 histone acetyltransferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR005756 Ribosomal_L26/L24P_euk/arc 8 121
IPR005824 KOW 51 82
No external refs found!