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  5. LOC_Os01g05420.1

LOC_Os01g05420.1


Description : component IWS1 of SPT6-IWS1 transcription elongation complex


Gene families : OG0004220 (Archaeplastida) Phylogenetic Tree(s): OG0004220_tree ,
OG_05_0007207 (LandPlants) Phylogenetic Tree(s): OG_05_0007207_tree ,
OG_06_0007722 (SeedPlants) Phylogenetic Tree(s): OG_06_0007722_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g05420.1
Cluster HCCA: Cluster_350

Target Alias Description ECC score Gene Family Method Actions
Cre10.g441000 No alias Protein IWS1 homolog 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
MA_171070g0010 No alias component IWS1 of SPT6-IWS1 transcription elongation complex 0.03 Archaeplastida
Solyc06g066320.3.1 No alias component IWS1 of SPT6-IWS1 transcription elongation complex 0.05 Archaeplastida
Zm00001e016922_P001 No alias component IWS1 of SPT6-IWS1 transcription elongation complex 0.04 Archaeplastida
Zm00001e025802_P001 No alias component IWS1 of SPT6-IWS1 transcription elongation complex 0.07 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004864 protein phosphatase inhibitor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0007155 cell adhesion IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0010921 regulation of phosphatase activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
MF GO:0019212 phosphatase inhibitor activity IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
BP GO:0022610 biological adhesion IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0035303 regulation of dephosphorylation IEP Neighborhood
BP GO:0035304 regulation of protein dephosphorylation IEP Neighborhood
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051336 regulation of hydrolase activity IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR017923 TFIIS_N 358 403
No external refs found!