AMTR_s00001p00272410 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.525

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000288 (LandPlants) Phylogenetic Tree(s): OG_05_0000288_tree ,
OG_06_0000157 (SeedPlants) Phylogenetic Tree(s): OG_06_0000157_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00272410
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AT1G26780 AtMYB117, LOF1, MYB117 myb domain protein 117 0.03 Archaeplastida
AT1G63910 MYB103, AtMYB103 myb domain protein 103 0.03 Archaeplastida
AT1G69560 LOF2, MYB105, ATMYB105 myb domain protein 105 0.03 Archaeplastida
AT1G73410 MYB54, ATMYB54 myb domain protein 54 0.02 Archaeplastida
AT1G79180 ATMYB63, MYB63 myb domain protein 63 0.03 Archaeplastida
AT2G47190 MYB2, ATMYB2 myb domain protein 2 0.04 Archaeplastida
AT3G02940 AtMYB107, MYB107 myb domain protein 107 0.03 Archaeplastida
AT3G13540 ATMYB5, MYB5 myb domain protein 5 0.03 Archaeplastida
AT3G23250 ATMYB15, ATY19, MYB15 myb domain protein 15 0.03 Archaeplastida
AT3G27785 PGA37, ATMYB118, MYB118 myb domain protein 118 0.04 Archaeplastida
AT3G29020 MYB110, AtMYB110 myb domain protein 110 0.04 Archaeplastida
AT3G50060 MYB77 myb domain protein 77 0.03 Archaeplastida
AT3G61250 AtMYB17, MYB17 myb domain protein 17 0.03 Archaeplastida
AT4G17785 MYB39 myb domain protein 39 0.03 Archaeplastida
AT4G18770 AtMYB98, MYB98 myb domain protein 98 0.02 Archaeplastida
AT4G22680 AtMYB85, MYB85 myb domain protein 85 0.03 Archaeplastida
AT4G33450 ATMYB69, MYB69 myb domain protein 69 0.03 Archaeplastida
AT4G34990 MYB32, AtMYB32 myb domain protein 32 0.03 Archaeplastida
AT5G11050 MYB64, AtMYB64 myb domain protein 64 0.03 Archaeplastida
AT5G17800 MYB56, AtMYB56 myb domain protein 56 0.04 Archaeplastida
AT5G40330 ATMYBRTF, ATMYB23, MYB23 myb domain protein 23 0.01 Archaeplastida
AT5G55020 ATMYB120, MYB120 myb domain protein 120 0.03 Archaeplastida
AT5G62320 ATMYB99, ATMYBCU15, MYB99 myb domain protein 99 0.03 Archaeplastida
AT5G62470 MYBCOV1, MYB96, ATMYB96 myb domain protein 96 0.03 Archaeplastida
Cre07.g345350 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01007981001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01008090001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01008303001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01009280001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01009566001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01014770001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01015264001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01016393001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01016800001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01019410001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01019967001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01020038001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01024353001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01029941001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01031341001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01032467001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01032564001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01035041001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01035177001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01036712001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01036802001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Gb_01889 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_03227 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_03994 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_05115 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_06298 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_11232 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_22239 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_29789 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_29933 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_40065 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g16810.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g45090.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g59660.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g63680.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g65370.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g74590.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os02g41510.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os03g20090.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os03g25550.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os03g38210.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os04g08590.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os04g38740.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os05g04210.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os05g46610.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os05g48010.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os05g49310.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os07g31470.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os07g43580.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os07g48870.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os08g15020.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os08g33940.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os09g36730.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os11g45740.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os12g03150.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os12g07610.1 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10431212g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10431610g0040 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_139448g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_158319g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_16413g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_173523g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_190973g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_298677g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_355131g0010 No alias transcription factor (MYB) 0.01 Archaeplastida
MA_437179g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_492415g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_52293g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_64405g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_66255g0010 No alias transcription factor (MYB) 0.01 Archaeplastida
MA_8846750g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_9374017g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_9476g0040 No alias Transcription factor MYB3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_95012g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_95747g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp1g09420.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp1g13010.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Pp3c14_14030V3.1 No alias Homeodomain-like protein 0.01 Archaeplastida
Pp3c15_7790V3.1 No alias myb domain protein 55 0.02 Archaeplastida
Pp3c1_1650V3.1 No alias myb domain protein 105 0.01 Archaeplastida
Pp3c1_4970V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Pp3c25_3170V3.1 No alias myb domain protein 16 0.04 Archaeplastida
Pp3c6_9970V3.1 No alias myb domain protein 106 0.04 Archaeplastida
Pp3c7_23450V3.1 No alias myb domain protein 106 0.05 Archaeplastida
Pp3c7_23490V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Pp3c8_16720V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c9_24170V3.1 No alias myb domain protein 33 0.02 Archaeplastida
Smo6091 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Solyc01g057910.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc01g079620.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc01g094360.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc02g067760.4.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc02g089190.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc03g113530.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g121740.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc04g074170.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc04g077260.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc05g007690.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc05g007710.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc05g014290.4.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc05g048830.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc05g051550.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc05g053150.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc06g073640.4.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc06g076840.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc08g076710.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc08g082890.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc09g011780.3.1 No alias transcription factor (MYB) 0.01 Archaeplastida
Solyc10g005460.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc10g008700.3.1 No alias No annotation 0.03 Archaeplastida
Solyc12g049350.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e001399_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e001803_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e002919_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e004164_P002 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e005044_P002 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e007337_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e007904_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e009453_P002 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e009831_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e009849_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e010995_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e013452_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e013910_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e014925_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e015235_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e017496_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e020004_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e022450_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e024322_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e027003_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e028201_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e029816_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e030961_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e031799_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e035619_P002 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e039235_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e040155_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e041055_P001 No alias transcription factor (MYB). transcriptional key... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!