LOC_Os01g08260.1

Description : subfamily ABCG transporter

Gene families : OG0000050 (Archaeplastida) Phylogenetic Tree(s): OG0000050_tree ,
OG_05_0001572 (LandPlants) Phylogenetic Tree(s): OG_05_0001572_tree ,
OG_06_0005088 (SeedPlants) Phylogenetic Tree(s): OG_06_0005088_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g08260.1
Cluster	HCCA: Cluster_48

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00012p00224800	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.05	Archaeplastida
AMTR_s00122p00085720	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.06	Archaeplastida
AT1G59870	PEN3, ABCG36,...	ABC-2 and Plant PDR ABC-type transporter family protein	0.03	Archaeplastida
AT2G26910	PDR4, ATPDR4	pleiotropic drug resistance 4	0.1	Archaeplastida
AT2G37280	ATPDR5, PDR5	pleiotropic drug resistance 5	0.04	Archaeplastida
GSVIVT01016993001	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
GSVIVT01016998001	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
GSVIVT01017201001	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
GSVIVT01017676001	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
GSVIVT01034745001	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
GSVIVT01034748001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
GSVIVT01035715001	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
Gb_15305	No alias	cuticular lipid exporter (PEC1). subfamily ABCG transporter	0.03	Archaeplastida
Gb_15493	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Gb_34309	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Gb_34310	No alias	ABC transporter G family member 31 OS=Arabidopsis...	0.02	Archaeplastida
Gb_34645	No alias	subfamily ABCG transporter	0.05	Archaeplastida
Gb_37007	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Gb_38109	No alias	subfamily ABCG transporter	0.02	Archaeplastida
LOC_Os11g37700.1	No alias	subfamily ABCG transporter	0.04	Archaeplastida
MA_10426781g0010	No alias	subfamily ABCG transporter	0.03	Archaeplastida
MA_117094g0010	No alias	no description available(sp\|h6ws94\|pdr1_pethy : 134.0)	0.03	Archaeplastida
MA_12781g0010	No alias	ABC transporter G family member 31 OS=Oryza sativa...	0.03	Archaeplastida
MA_12965g0010	No alias	subfamily ABCG transporter	0.03	Archaeplastida
MA_135152g0010	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Mp1g25350.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Mp2g07030.1	No alias	subfamily ABCG transporter	0.07	Archaeplastida
Mp2g21800.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Mp4g05490.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Mp4g06670.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Pp3c16_13830V3.1	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.03	Archaeplastida
Pp3c16_9600V3.1	No alias	pleiotropic drug resistance 11	0.02	Archaeplastida
Pp3c4_2380V3.1	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.02	Archaeplastida
Pp3c5_3240V3.1	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.04	Archaeplastida
Smo101338	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Smo115821	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
Smo267739	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Smo424639	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Smo96729	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Solyc02g081870.4.1	No alias	abscisic acid transporter (ABCG31). subfamily ABCG transporter	0.03	Archaeplastida
Solyc05g018510.3.1	No alias	cuticular lipid exporter (PEC1). subfamily ABCG transporter	0.05	Archaeplastida
Solyc05g053610.2.1	No alias	subfamily ABCG transporter	0.04	Archaeplastida
Solyc05g055330.3.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Solyc06g065670.4.1	No alias	cuticular lipid exporter (PEC1). subfamily ABCG transporter	0.05	Archaeplastida
Solyc08g067620.2.1	No alias	subfamily ABCG transporter	0.05	Archaeplastida
Solyc09g091670.3.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Solyc12g019620.2.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Solyc12g019640.2.1	No alias	subfamily ABCG transporter	0.04	Archaeplastida
Solyc12g100190.2.1	No alias	subfamily ABCG transporter	0.04	Archaeplastida
Zm00001e006460_P001	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Zm00001e016714_P002	No alias	cuticular lipid exporter (PEC1). subfamily ABCG transporter	0.06	Archaeplastida
Zm00001e024257_P001	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Zm00001e030669_P001	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Zm00001e037233_P001	No alias	subfamily ABCG transporter	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003779	actin binding	IEP	Neighborhood
MF	GO:0003924	GTPase activity	IEP	Neighborhood
MF	GO:0004175	endopeptidase activity	IEP	Neighborhood
MF	GO:0004252	serine-type endopeptidase activity	IEP	Neighborhood
MF	GO:0004367	glycerol-3-phosphate dehydrogenase [NAD+] activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
CC	GO:0005618	cell wall	IEP	Neighborhood
BP	GO:0006072	glycerol-3-phosphate metabolic process	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006633	fatty acid biosynthetic process	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
MF	GO:0008092	cytoskeletal protein binding	IEP	Neighborhood
BP	GO:0008150	biological_process	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
MF	GO:0008236	serine-type peptidase activity	IEP	Neighborhood
BP	GO:0009987	cellular process	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0017171	serine hydrolase activity	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
CC	GO:0030312	external encapsulating structure	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0043170	macromolecule metabolic process	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0044237	cellular metabolic process	IEP	Neighborhood
BP	GO:0044238	primary metabolic process	IEP	Neighborhood
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Neighborhood
BP	GO:0046168	glycerol-3-phosphate catabolic process	IEP	Neighborhood
CC	GO:0048046	apoplast	IEP	Neighborhood
BP	GO:0052646	alditol phosphate metabolic process	IEP	Neighborhood
BP	GO:0071704	organic substance metabolic process	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	40	190
IPR013525	ABC_2_trans	336	549

External Links

No external refs found!

LOC_Os01g08260.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation