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  5. LOC_Os01g11240.1

LOC_Os01g11240.1


Description : no hits & (original description: none)


Gene families : OG0000382 (Archaeplastida) Phylogenetic Tree(s): OG0000382_tree ,
OG_05_0000235 (LandPlants) Phylogenetic Tree(s): OG_05_0000235_tree ,
OG_06_0000343 (SeedPlants) Phylogenetic Tree(s): OG_06_0000343_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g11240.1
Cluster HCCA: Cluster_270

Target Alias Description ECC score Gene Family Method Actions
Gb_40920 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os07g02850.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g02880.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g02920.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g38240.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10435514g0030 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_500179g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_73238g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_813524g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c17_12850V3.1 No alias Protein of unknown function, DUF538 0.03 Archaeplastida
Zm00001e004354_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e020996_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0004474 malate synthase activity IEP Neighborhood
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Neighborhood
BP GO:0006081 cellular aldehyde metabolic process IEP Neighborhood
BP GO:0006097 glyoxylate cycle IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0046487 glyoxylate metabolic process IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR007493 DUF538 27 139
No external refs found!