1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os01g12940.1

LOC_Os01g12940.1


Description : Bark storage protein A OS=Populus deltoides (sp|q07469|bspa_popde : 108.0)


Gene families : OG0001829 (Archaeplastida) Phylogenetic Tree(s): OG0001829_tree ,
OG_05_0001245 (LandPlants) Phylogenetic Tree(s): OG_05_0001245_tree ,
OG_06_0000877 (SeedPlants) Phylogenetic Tree(s): OG_06_0000877_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g12940.1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00105850 evm_27.TU.AmTr_v1... Bark storage protein A OS=Populus deltoides 0.03 Archaeplastida
AT4G24340 No alias Phosphorylase superfamily protein 0.03 Archaeplastida
AT4G24350 No alias Phosphorylase superfamily protein 0.06 Archaeplastida
AT4G28940 No alias Phosphorylase superfamily protein 0.04 Archaeplastida
GSVIVT01035644001 No alias Bark storage protein A OS=Populus deltoides 0.03 Archaeplastida
Gb_28226 No alias Bark storage protein A OS=Populus deltoides... 0.05 Archaeplastida
LOC_Os05g13970.1 No alias Bark storage protein A OS=Populus deltoides... 0.05 Archaeplastida
Solyc11g007730.2.1 No alias Bark storage protein A OS=Populus deltoides... 0.01 Archaeplastida
Zm00001e036682_P001 No alias Bark storage protein B OS=Populus deltoides... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
BP GO:0009116 nucleoside metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006575 cellular modified amino acid metabolic process IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
BP GO:0015939 pantothenate metabolic process IEP Neighborhood
BP GO:0015940 pantothenate biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0043647 inositol phosphate metabolic process IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
BP GO:0046164 alcohol catabolic process IEP Neighborhood
BP GO:0046174 polyol catabolic process IEP Neighborhood
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Neighborhood
BP GO:0046855 inositol phosphate dephosphorylation IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:0071545 inositol phosphate catabolic process IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901616 organic hydroxy compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000845 Nucleoside_phosphorylase_d 19 286
No external refs found!