AT1G28310

Description : Dof-type zinc finger DNA-binding family protein

Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0042119 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G28310
Cluster	HCCA: Cluster_202

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00119p00099150	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.04	Archaeplastida
Gb_12877	No alias	transcription factor (DOF)	0.02	Archaeplastida
LOC_Os01g17000.1	No alias	transcription factor (DOF)	0.08	Archaeplastida
LOC_Os03g60630.1	No alias	transcription factor (DOF)	0.07	Archaeplastida
LOC_Os07g13260.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os12g38200.1	No alias	transcription factor (DOF)	0.02	Archaeplastida
MA_248613g0010	No alias	No annotation	0.03	Archaeplastida
MA_939289g0010	No alias	transcription factor (DOF)	0.02	Archaeplastida
Mp2g20790.1	No alias	transcription factor (DOF)	0.01	Archaeplastida
Pp3c13_2000V3.1	No alias	cycling DOF factor 3	0.03	Archaeplastida
Solyc02g076850.2.1	No alias	transcription factor (DOF)	0.05	Archaeplastida
Zm00001e003414_P001	No alias	transcription factor (DOF)	0.06	Archaeplastida
Zm00001e006190_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e007228_P002	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e010454_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e011750_P002	No alias	transcription factor (DOF)	0.02	Archaeplastida
Zm00001e029641_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0001067	regulatory region nucleic acid binding	IEP	Neighborhood
BP	GO:0002237	response to molecule of bacterial origin	IEP	Neighborhood
MF	GO:0003779	actin binding	IEP	Neighborhood
MF	GO:0003923	GPI-anchor transamidase activity	IEP	Neighborhood
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Neighborhood
BP	GO:0006109	regulation of carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0006555	methionine metabolic process	IEP	Neighborhood
BP	GO:0007165	signal transduction	IEP	Neighborhood
MF	GO:0008092	cytoskeletal protein binding	IEP	Neighborhood
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0009086	methionine biosynthetic process	IEP	Neighborhood
BP	GO:0009653	anatomical structure morphogenesis	IEP	Neighborhood
BP	GO:0009742	brassinosteroid mediated signaling pathway	IEP	Neighborhood
MF	GO:0010011	auxin binding	IEP	Neighborhood
BP	GO:0010074	maintenance of meristem identity	IEP	Neighborhood
BP	GO:0010103	stomatal complex morphogenesis	IEP	Neighborhood
BP	GO:0010152	pollen maturation	IEP	Neighborhood
BP	GO:0010492	maintenance of shoot apical meristem identity	IEP	Neighborhood
BP	GO:0010675	regulation of cellular carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0019321	pentose metabolic process	IEP	Neighborhood
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Neighborhood
BP	GO:0019827	stem cell population maintenance	IEP	Neighborhood
BP	GO:0032880	regulation of protein localization	IEP	Neighborhood
BP	GO:0032881	regulation of polysaccharide metabolic process	IEP	Neighborhood
MF	GO:0042562	hormone binding	IEP	Neighborhood
BP	GO:0042732	D-xylose metabolic process	IEP	Neighborhood
BP	GO:0043401	steroid hormone mediated signaling pathway	IEP	Neighborhood
MF	GO:0043621	protein self-association	IEP	Neighborhood
MF	GO:0044212	transcription regulatory region DNA binding	IEP	Neighborhood
MF	GO:0046982	protein heterodimerization activity	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood
BP	GO:0048437	floral organ development	IEP	Neighborhood
BP	GO:0048443	stamen development	IEP	Neighborhood
BP	GO:0048527	lateral root development	IEP	Neighborhood
BP	GO:0048528	post-embryonic root development	IEP	Neighborhood
BP	GO:0048768	root hair cell tip growth	IEP	Neighborhood
BP	GO:0048827	phyllome development	IEP	Neighborhood
BP	GO:0051301	cell division	IEP	Neighborhood
BP	GO:0071229	cellular response to acid chemical	IEP	Neighborhood
BP	GO:0071241	cellular response to inorganic substance	IEP	Neighborhood
BP	GO:0071249	cellular response to nitrate	IEP	Neighborhood
BP	GO:0080022	primary root development	IEP	Neighborhood
BP	GO:0090626	plant epidermis morphogenesis	IEP	Neighborhood
BP	GO:0090696	post-embryonic plant organ development	IEP	Neighborhood
BP	GO:0090698	post-embryonic plant morphogenesis	IEP	Neighborhood
BP	GO:0098727	maintenance of cell number	IEP	Neighborhood
BP	GO:0099402	plant organ development	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
BP	GO:1901699	cellular response to nitrogen compound	IEP	Neighborhood
BP	GO:1902170	cellular response to reactive nitrogen species	IEP	Neighborhood
BP	GO:2000904	regulation of starch metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	26	81

External Links

No external refs found!

AT1G28310

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation