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  5. AMTR_s00002p00096860

AMTR_s00002p00096860 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.54

Description : External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp70 family.DnaK protein


Gene families : OG0000216 (Archaeplastida) Phylogenetic Tree(s): OG0000216_tree ,
OG_05_0002135 (LandPlants) Phylogenetic Tree(s): OG_05_0002135_tree ,
OG_06_0002033 (SeedPlants) Phylogenetic Tree(s): OG_06_0002033_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00096860
Cluster HCCA: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
AT5G42020 BIP, BIP2 Heat shock protein 70 (Hsp 70) family protein 0.05 Archaeplastida
Cpa|evm.model.tig00000241.33 No alias External stimuli response.temperature.Hsp... 0.04 Archaeplastida
Cre08.g372100 No alias External stimuli response.temperature.Hsp... 0.02 Archaeplastida
GSVIVT01019607001 No alias External stimuli response.temperature.Hsp... 0.05 Archaeplastida
GSVIVT01038580001 No alias External stimuli response.temperature.Hsp... 0.07 Archaeplastida
LOC_Os02g02410.1 No alias Heat shock 70 kDa protein BIP1 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Smo440382 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
Solyc08g082820.4.1 No alias Luminal-binding protein OS=Solanum lycopersicum... 0.04 Archaeplastida
Zm00001e013457_P002 No alias Luminal-binding protein 2 OS=Zea mays... 0.05 Archaeplastida
Zm00001e025370_P001 No alias no hits & (original description: none) 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
InterPro domains Description Start Stop
IPR013126 Hsp_70_fam 44 651
No external refs found!