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  5. LOC_Os01g31800.1

LOC_Os01g31800.1


Description : histone (H2A)


Gene families : OG0000174 (Archaeplastida) Phylogenetic Tree(s): OG0000174_tree ,
OG_05_0000204 (LandPlants) Phylogenetic Tree(s): OG_05_0000204_tree ,
OG_06_0000166 (SeedPlants) Phylogenetic Tree(s): OG_06_0000166_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g31800.1
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AT1G51060 HTA10 histone H2A 10 0.07 Archaeplastida
AT3G20670 HTA13 histone H2A 13 0.08 Archaeplastida
AT4G27230 HTA2 histone H2A 2 0.04 Archaeplastida
AT5G59870 HTA6 histone H2A 6 0.09 Archaeplastida
Cre06.g264750 No alias Chromatin organisation.histones.H2A-type histone 0.01 Archaeplastida
Cre06.g264950 No alias Chromatin organisation.histones.H2A-type histone 0.01 Archaeplastida
Cre06.g265350 No alias Chromatin organisation.histones.H2A-type histone 0.01 Archaeplastida
Cre06.g266700 No alias Chromatin organisation.histones.H2A-type histone 0.01 Archaeplastida
Cre06.g268050 No alias Chromatin organisation.histones.H2A-type histone 0.01 Archaeplastida
Cre06.g268300 No alias Chromatin organisation.histones.H2A-type histone 0.01 Archaeplastida
Cre06.g271350 No alias Chromatin organisation.histones.H2A-type histone 0.01 Archaeplastida
Cre06.g273900 No alias Chromatin organisation.histones.H2A-type histone 0.01 Archaeplastida
Cre06.g274200 No alias Chromatin organisation.histones.H2A-type histone 0.01 Archaeplastida
Cre06.g274800 No alias Chromatin organisation.histones.H2A-type histone 0.01 Archaeplastida
Cre06.g275850 No alias Chromatin organisation.histones.H2A-type histone 0.01 Archaeplastida
Cre06.g276500 No alias Chromatin organisation.histones.H2A-type histone 0.01 Archaeplastida
Cre06.g276950 No alias Chromatin organisation.histones.H2A-type histone 0.01 Archaeplastida
Cre12.g504500 No alias Chromatin organisation.histones.H2A-type histone 0.01 Archaeplastida
Cre12.g504750 No alias Chromatin organisation.histones.H2A-type histone 0.01 Archaeplastida
Cre12.g505550 No alias Chromatin organisation.histones.H2A-type histone 0.01 Archaeplastida
Cre12.g506250 No alias Chromatin organisation.histones.H2A-type histone 0.01 Archaeplastida
Cre13.g570100 No alias Chromatin organisation.histones.H2A-type histone 0.01 Archaeplastida
Cre13.g590800 No alias Chromatin organisation.histones.H2A-type histone 0.01 Archaeplastida
Cre13.g591150 No alias Chromatin organisation.histones.H2A-type histone 0.01 Archaeplastida
Cre17.g708550 No alias Chromatin organisation.histones.H2A-type histone 0.01 Archaeplastida
Cre17.g709200 No alias Chromatin organisation.histones.H2A-type histone 0.01 Archaeplastida
Cre17.g710400 No alias Chromatin organisation.histones.H2A-type histone 0.01 Archaeplastida
Cre17.g711700 No alias Chromatin organisation.histones.H2A-type histone 0.01 Archaeplastida
Cre17.g713400 No alias Chromatin organisation.histones.H2A-type histone 0.01 Archaeplastida
Cre17.g714500 No alias Chromatin organisation.histones.H2A-type histone 0.01 Archaeplastida
GSVIVT01011034001 No alias Chromatin organisation.histones.H2A-type histone 0.06 Archaeplastida
GSVIVT01031123001 No alias Chromatin organisation.histones.H2A-type histone 0.03 Archaeplastida
Gb_25326 No alias histone (H2A) 0.02 Archaeplastida
Gb_39944 No alias histone (H2A) 0.02 Archaeplastida
MA_213048g0010 No alias histone (H2A) 0.02 Archaeplastida
MA_22203g0020 No alias histone (H2A) 0.02 Archaeplastida
MA_74667g0010 No alias histone (H2A) 0.02 Archaeplastida
MA_94328g0020 No alias histone (H2A) 0.02 Archaeplastida
Mp2g00760.1 No alias histone (H2A) 0.03 Archaeplastida
Mp3g00840.1 No alias histone (H2A) 0.03 Archaeplastida
Pp3c6_29410V3.1 No alias histone H2A 10 0.02 Archaeplastida
Solyc01g099410.3.1 No alias histone (H2A) 0.07 Archaeplastida
Solyc09g010400.3.1 No alias histone (H2A) 0.08 Archaeplastida
Solyc09g074300.1.1 No alias histone (H2A) 0.04 Archaeplastida
Solyc09g082710.3.1 No alias histone (H2A) 0.03 Archaeplastida
Solyc10g006560.4.1 No alias histone (H2A) 0.02 Archaeplastida
Solyc11g073250.2.1 No alias histone (H2A) 0.1 Archaeplastida
Zm00001e010232_P001 No alias histone (H2A) 0.03 Archaeplastida
Zm00001e010515_P001 No alias histone (H2A) 0.04 Archaeplastida
Zm00001e011643_P001 No alias histone (H2A) 0.1 Archaeplastida
Zm00001e020483_P001 No alias histone (H2A) 0.1 Archaeplastida
Zm00001e033014_P001 No alias histone (H2A) 0.11 Archaeplastida
Zm00001e034815_P001 No alias histone (H2A) 0.08 Archaeplastida
Zm00001e035183_P002 No alias histone (H2A) 0.03 Archaeplastida
Zm00001e038465_P002 No alias histone (H2A) 0.04 Archaeplastida
Zm00001e039735_P001 No alias histone (H2A) 0.15 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
BP GO:0006270 DNA replication initiation IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
BP GO:0007059 chromosome segregation IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0045132 meiotic chromosome segregation IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
CC GO:0098687 chromosomal region IEP Neighborhood
BP GO:0098813 nuclear chromosome segregation IEP Neighborhood
BP GO:1903046 meiotic cell cycle process IEP Neighborhood
InterPro domains Description Start Stop
IPR032454 Histone_H2A_C 105 138
IPR007125 Histone_H2A/H2B/H3 20 102
No external refs found!