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  5. LOC_Os01g32770.1

LOC_Os01g32770.1


Description : transcription factor (AS2/LOB)


Gene families : OG0000724 (Archaeplastida) Phylogenetic Tree(s): OG0000724_tree ,
OG_05_0000483 (LandPlants) Phylogenetic Tree(s): OG_05_0000483_tree ,
OG_06_0000437 (SeedPlants) Phylogenetic Tree(s): OG_06_0000437_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g32770.1
Cluster HCCA: Cluster_355

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00088960 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
AMTR_s00137p00087340 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.05 Archaeplastida
AT1G67100 LBD40 LOB domain-containing protein 40 0.04 Archaeplastida
AT3G02550 LBD41 LOB domain-containing protein 41 0.05 Archaeplastida
AT4G37540 LBD39 LOB domain-containing protein 39 0.04 Archaeplastida
AT5G67420 LBD37, ASL39 LOB domain-containing protein 37 0.04 Archaeplastida
GSVIVT01000141001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 Archaeplastida
GSVIVT01008284001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
GSVIVT01011896001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
GSVIVT01031035001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.09 Archaeplastida
Gb_36943 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
LOC_Os01g03890.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_223267g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_70989g0010 No alias transcription factor (AS2/LOB) 0.05 Archaeplastida
MA_73565g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_80122g0010 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Pp3c18_9980V3.1 No alias LOB domain-containing protein 37 0.03 Archaeplastida
Solyc02g085910.4.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc03g119530.3.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Zm00001e001981_P001 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Zm00001e005129_P001 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Zm00001e010676_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e017028_P001 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Zm00001e027415_P001 No alias transcription factor (AS2/LOB) 0.06 Archaeplastida
Zm00001e027417_P001 No alias transcription factor (AS2/LOB) 0.06 Archaeplastida
Zm00001e032150_P001 No alias transcription factor (AS2/LOB) 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Neighborhood
BP GO:0045927 positive regulation of growth IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004883 LOB 4 103
No external refs found!