1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os01g40340.1

LOC_Os01g40340.1


Description : no hits & (original description: none)


Gene families : OG0001469 (Archaeplastida) Phylogenetic Tree(s): OG0001469_tree ,
OG_05_0001631 (LandPlants) Phylogenetic Tree(s): OG_05_0001631_tree ,
OG_06_0002000 (SeedPlants) Phylogenetic Tree(s): OG_06_0002000_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g40340.1
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00148p00040560 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00155p00077490 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT3G45190 No alias SIT4 phosphatase-associated family protein 0.03 Archaeplastida
Cpa|evm.model.tig00000113.33 No alias No description available 0.01 Archaeplastida
Cre12.g484150 No alias No description available 0.04 Archaeplastida
GSVIVT01021620001 No alias No description available 0.08 Archaeplastida
Gb_14287 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_123750g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp1g18680.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c12_11280V3.1 No alias SIT4 phosphatase-associated family protein 0.05 Archaeplastida
Pp3c4_5240V3.1 No alias SIT4 phosphatase-associated family protein 0.03 Archaeplastida
Smo419685 No alias No description available 0.06 Archaeplastida
Solyc06g011665.1.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Solyc11g069490.3.1 No alias no hits & (original description: none) 0.11 Archaeplastida
Zm00001e020549_P002 No alias no hits & (original description: none) 0.13 Archaeplastida
Zm00001e027801_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e032567_P002 No alias no hits & (original description: none) 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0019903 protein phosphatase binding IEA Interproscan
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005244 voltage-gated ion channel activity IEP Neighborhood
MF GO:0005247 voltage-gated chloride channel activity IEP Neighborhood
MF GO:0005253 anion channel activity IEP Neighborhood
MF GO:0005254 chloride channel activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0006354 DNA-templated transcription, elongation IEP Neighborhood
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006821 chloride transport IEP Neighborhood
CC GO:0008023 transcription elongation factor complex IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008308 voltage-gated anion channel activity IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015108 chloride transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
CC GO:0016593 Cdc73/Paf1 complex IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0022832 voltage-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR007587 SAPS 253 386
IPR007587 SAPS 28 252
No external refs found!