1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os01g43940.1

LOC_Os01g43940.1


Description : oligopeptide transporter (OPT)


Gene families : OG0000597 (Archaeplastida) Phylogenetic Tree(s): OG0000597_tree ,
OG_05_0000449 (LandPlants) Phylogenetic Tree(s): OG_05_0000449_tree ,
OG_06_0002900 (SeedPlants) Phylogenetic Tree(s): OG_06_0002900_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g43940.1
Cluster HCCA: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01009224001 No alias Solute transport.carrier-mediated transport.OPT... 0.03 Archaeplastida
GSVIVT01014724001 No alias Solute transport.carrier-mediated transport.OPT... 0.04 Archaeplastida
GSVIVT01018764001 No alias Solute transport.carrier-mediated transport.OPT... 0.04 Archaeplastida
Gb_02113 No alias oligopeptide transporter (OPT) 0.02 Archaeplastida
Gb_05061 No alias oligopeptide transporter (OPT) 0.03 Archaeplastida
LOC_Os02g46850.1 No alias oligopeptide transporter (OPT) 0.03 Archaeplastida
MA_8171243g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp4g15510.1 No alias oligopeptide transporter (OPT) 0.02 Archaeplastida
Pp3c12_8540V3.1 No alias oligopeptide transporter 7 0.03 Archaeplastida
Smo229868 No alias Solute transport.carrier-mediated transport.OPT... 0.03 Archaeplastida
Solyc03g082700.4.1 No alias oligopeptide transporter (OPT) 0.03 Archaeplastida
Solyc04g076780.4.1 No alias oligopeptide transporter (OPT) 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004813 OPT 44 714
No external refs found!