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  5. LOC_Os01g45250.1

LOC_Os01g45250.1


Description : no hits & (original description: none)


Gene families : OG0004065 (Archaeplastida) Phylogenetic Tree(s): OG0004065_tree ,
OG_05_0002827 (LandPlants) Phylogenetic Tree(s): OG_05_0002827_tree ,
OG_06_0001660 (SeedPlants) Phylogenetic Tree(s): OG_06_0001660_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g45250.1
Cluster HCCA: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
AT1G23710 No alias Protein of unknown function (DUF1645) 0.09 Archaeplastida
AT1G70420 No alias Protein of unknown function (DUF1645) 0.05 Archaeplastida
AT3G27880 No alias Protein of unknown function (DUF1645) 0.02 Archaeplastida
AT5G62770 No alias Protein of unknown function (DUF1645) 0.02 Archaeplastida
GSVIVT01032463001 No alias No description available 0.05 Archaeplastida
Solyc03g114350.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc04g024780.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc05g005260.3.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e020252_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e020361_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e027955_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e032468_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e032512_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR012442 DUF1645_plant 40 225
No external refs found!