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Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.170
Description : Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana
Gene families : OG0000235 (Archaeplastida) Phylogenetic Tree(s): OG0000235_tree ,
OG_05_0000298 (LandPlants) Phylogenetic Tree(s): OG_05_0000298_tree ,
OG_06_0010817 (SeedPlants) Phylogenetic Tree(s): OG_06_0010817_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00002p00190720 | |
| Cluster | HCCA: Cluster_248 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| GSVIVT01018303001 | No alias | Pentatricopeptide repeat-containing protein At1g02150... | 0.06 | Archaeplastida | |
| GSVIVT01020533001 | No alias | Pentatricopeptide repeat-containing protein At2g20710,... | 0.02 | Archaeplastida | |
| Gb_03507 | No alias | Pentatricopeptide repeat-containing protein At4g02820,... | 0.03 | Archaeplastida | |
| Gb_14576 | No alias | Pentatricopeptide repeat-containing protein At1g60770... | 0.05 | Archaeplastida | |
| Gb_38114 | No alias | RNA editing factor (POCO) | 0.06 | Archaeplastida | |
| LOC_Os02g55310.1 | No alias | Pentatricopeptide repeat-containing protein At5g27460... | 0.02 | Archaeplastida | |
| LOC_Os04g25410.1 | No alias | Pentatricopeptide repeat-containing protein At1g60770... | 0.03 | Archaeplastida | |
| LOC_Os04g46010.1 | No alias | Pentatricopeptide repeat-containing protein At1g02150... | 0.03 | Archaeplastida | |
| LOC_Os12g34340.1 | No alias | Pentatricopeptide repeat-containing protein At4g02820,... | 0.02 | Archaeplastida | |
| Smo444770 | No alias | Pentatricopeptide repeat-containing protein At3g15590,... | 0.02 | Archaeplastida | |
| Solyc01g081320.4.1 | No alias | Pentatricopeptide repeat-containing protein At5g27460... | 0.04 | Archaeplastida | |
| Solyc01g089870.3.1 | No alias | Pentatricopeptide repeat-containing protein At1g02150... | 0.06 | Archaeplastida | |
| Zm00001e007372_P001 | No alias | Pentatricopeptide repeat-containing protein At1g02150... | 0.05 | Archaeplastida | |
| Zm00001e040185_P001 | No alias | Pentatricopeptide repeat-containing protein At1g07590,... | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | Neighborhood |
| MF | GO:0001882 | nucleoside binding | IEP | Neighborhood |
| MF | GO:0001883 | purine nucleoside binding | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0004325 | ferrochelatase activity | IEP | Neighborhood |
| MF | GO:0004556 | alpha-amylase activity | IEP | Neighborhood |
| MF | GO:0004645 | phosphorylase activity | IEP | Neighborhood |
| MF | GO:0004826 | phenylalanine-tRNA ligase activity | IEP | Neighborhood |
| MF | GO:0005525 | GTP binding | IEP | Neighborhood |
| BP | GO:0006081 | cellular aldehyde metabolic process | IEP | Neighborhood |
| BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Neighborhood |
| BP | GO:0006396 | RNA processing | IEP | Neighborhood |
| BP | GO:0006432 | phenylalanyl-tRNA aminoacylation | IEP | Neighborhood |
| BP | GO:0006721 | terpenoid metabolic process | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0006766 | vitamin metabolic process | IEP | Neighborhood |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Neighborhood |
| BP | GO:0006772 | thiamine metabolic process | IEP | Neighborhood |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0006783 | heme biosynthetic process | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| MF | GO:0008184 | glycogen phosphorylase activity | IEP | Neighborhood |
| BP | GO:0008610 | lipid biosynthetic process | IEP | Neighborhood |
| BP | GO:0009058 | biosynthetic process | IEP | Neighborhood |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | Neighborhood |
| BP | GO:0009228 | thiamine biosynthetic process | IEP | Neighborhood |
| BP | GO:0009240 | isopentenyl diphosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| BP | GO:0016108 | tetraterpenoid metabolic process | IEP | Neighborhood |
| BP | GO:0016109 | tetraterpenoid biosynthetic process | IEP | Neighborhood |
| BP | GO:0016114 | terpenoid biosynthetic process | IEP | Neighborhood |
| BP | GO:0016116 | carotenoid metabolic process | IEP | Neighborhood |
| BP | GO:0016117 | carotenoid biosynthetic process | IEP | Neighborhood |
| MF | GO:0016160 | amylase activity | IEP | Neighborhood |
| MF | GO:0016987 | sigma factor activity | IEP | Neighborhood |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Neighborhood |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Neighborhood |
| BP | GO:0019288 | isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | IEP | Neighborhood |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0019682 | glyceraldehyde-3-phosphate metabolic process | IEP | Neighborhood |
| MF | GO:0032549 | ribonucleoside binding | IEP | Neighborhood |
| MF | GO:0032550 | purine ribonucleoside binding | IEP | Neighborhood |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Neighborhood |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Neighborhood |
| MF | GO:0033926 | glycopeptide alpha-N-acetylgalactosaminidase activity | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0042168 | heme metabolic process | IEP | Neighborhood |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Neighborhood |
| BP | GO:0042440 | pigment metabolic process | IEP | Neighborhood |
| BP | GO:0042723 | thiamine-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0042724 | thiamine-containing compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0046148 | pigment biosynthetic process | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| BP | GO:0046490 | isopentenyl diphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Neighborhood |
| No external refs found! |