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  5. LOC_Os01g46340.1

LOC_Os01g46340.1


Description : regulatory protein (IPGA) of cortical microtubule organisation


Gene families : OG0000973 (Archaeplastida) Phylogenetic Tree(s): OG0000973_tree ,
OG_05_0001732 (LandPlants) Phylogenetic Tree(s): OG_05_0001732_tree ,
OG_06_0000962 (SeedPlants) Phylogenetic Tree(s): OG_06_0000962_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g46340.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00127710 evm_27.TU.AmTr_v1... Protein CHUP1, chloroplastic OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00045p00113980 evm_27.TU.AmTr_v1... Protein CHUP1, chloroplastic OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00155p00024540 evm_27.TU.AmTr_v1... Protein CHUP1, chloroplastic OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00868p00010810 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT1G07120 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.07 Archaeplastida
GSVIVT01017698001 No alias Protein CHUP1, chloroplastic OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01021189001 No alias Protein CHUP1, chloroplastic OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01024701001 No alias Protein CHUP1, chloroplastic OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_08802 No alias regulatory protein (IPGA) of cortical microtubule organisation 0.03 Archaeplastida
Gb_35748 No alias regulatory protein (IPGA) of cortical microtubule organisation 0.03 Archaeplastida
MA_211108g0010 No alias regulatory protein (IPGA) of cortical microtubule organisation 0.02 Archaeplastida
MA_5633g0010 No alias Protein CHUP1, chloroplastic OS=Arabidopsis thaliana... 0.05 Archaeplastida
Mp7g03540.1 No alias motility factor (CHUP) 0.03 Archaeplastida
Pp3c7_17580V3.1 No alias Hydroxyproline-rich glycoprotein family protein 0.02 Archaeplastida
Solyc02g069560.3.1 No alias Protein CHUP1, chloroplastic OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc02g077090.4.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e020303_P001 No alias regulatory protein (IPGA) of cortical microtubule organisation 0.03 Archaeplastida
Zm00001e020802_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e032492_P004 No alias regulatory protein (IPGA) of cortical microtubule organisation 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005484 SNAP receptor activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0010274 hydrotropism IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!