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  5. LOC_Os01g46870.1

LOC_Os01g46870.1


Description : transcription factor (ERF)


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0017847 (LandPlants) Phylogenetic Tree(s): OG_05_0017847_tree ,
OG_06_0017392 (SeedPlants) Phylogenetic Tree(s): OG_06_0017392_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g46870.1
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AT1G36060 No alias Integrase-type DNA-binding superfamily protein 0.05 Archaeplastida
AT1G72360 HRE1 Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
LOC_Os02g43820.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os03g08460.1 No alias Ethylene-responsive transcription factor ERF073... 0.02 Archaeplastida
LOC_Os05g36100.1 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_425410g0010 No alias Ethylene-responsive transcription factor RAP2-13... 0.03 Archaeplastida
MA_502153g0010 No alias transcription factor (ERF) 0.04 Archaeplastida
MA_6344433g0010 No alias No annotation 0.02 Archaeplastida
MA_99821g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
Mp2g11080.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Pp3c3_33930V3.1 No alias Integrase-type DNA-binding superfamily protein 0.01 Archaeplastida
Pp3c5_22280V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c7_2300V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Solyc01g005630.3.1 No alias transcription factor (ERF). transcription factor (ERN1) 0.03 Archaeplastida
Solyc01g090340.3.1 No alias Ethylene-responsive transcription factor 13... 0.03 Archaeplastida
Solyc01g090370.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc03g005520.1.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc12g008350.3.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e000609_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e007332_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e013927_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e023157_P001 No alias transcription factor (DREB) 0.05 Archaeplastida
Zm00001e025064_P001 No alias transcription factor (ERF) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 101 151
No external refs found!