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  5. LOC_Os01g47400.1

LOC_Os01g47400.1


Description : endo-beta-1,4-mannanase


Gene families : OG0000315 (Archaeplastida) Phylogenetic Tree(s): OG0000315_tree ,
OG_05_0000179 (LandPlants) Phylogenetic Tree(s): OG_05_0000179_tree ,
OG_06_0001045 (SeedPlants) Phylogenetic Tree(s): OG_06_0001045_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g47400.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00202020 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.heteromannan.modification and... 0.05 Archaeplastida
AMTR_s00068p00182430 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.heteromannan.modification and... 0.02 Archaeplastida
AMTR_s00099p00070100 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.heteromannan.modification and... 0.03 Archaeplastida
AT3G10900 No alias Glycosyl hydrolase superfamily protein 0.02 Archaeplastida
GSVIVT01009746001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.03 Archaeplastida
GSVIVT01030163001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.02 Archaeplastida
GSVIVT01037212001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.03 Archaeplastida
GSVIVT01037214001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.04 Archaeplastida
Gb_04261 No alias endo-beta-1,4-mannanase 0.04 Archaeplastida
Gb_08848 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
Gb_28909 No alias endo-beta-1,4-mannanase 0.05 Archaeplastida
Gb_30579 No alias endo-beta-1,4-mannanase 0.04 Archaeplastida
Gb_33018 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
MA_10358593g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10426380g0010 No alias endo-beta-1,4-mannanase 0.05 Archaeplastida
MA_10427065g0010 No alias endo-beta-1,4-mannanase 0.01 Archaeplastida
MA_10433157g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10436185g0010 No alias Mannan endo-1,4-beta-mannosidase 2 OS=Arabidopsis... 0.05 Archaeplastida
MA_110162g0010 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
MA_111906g0010 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
MA_38956g0010 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
MA_6558g0010 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
MA_71720g0010 No alias endo-beta-1,4-mannanase 0.04 Archaeplastida
MA_8194133g0010 No alias Mannan endo-1,4-beta-mannosidase 2 OS=Arabidopsis... 0.06 Archaeplastida
Mp8g13380.1 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
Pp3c13_12000V3.1 No alias Glycosyl hydrolase superfamily protein 0.03 Archaeplastida
Pp3c2_29970V3.1 No alias Glycosyl hydrolase superfamily protein 0.02 Archaeplastida
Pp3c5_23790V3.1 No alias Glycosyl hydrolase superfamily protein 0.06 Archaeplastida
Pp3c6_26420V3.1 No alias Glycosyl hydrolase superfamily protein 0.02 Archaeplastida
Smo101148 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.03 Archaeplastida
Smo101525 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.02 Archaeplastida
Solyc02g084990.3.1 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
Solyc07g053920.3.1 No alias endo-beta-1,4-mannanase 0.05 Archaeplastida
Solyc10g074920.2.1 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
Solyc12g013770.3.1 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
Zm00001e019799_P001 No alias No annotation 0.08 Archaeplastida
Zm00001e020240_P001 No alias endo-beta-1,4-mannanase 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005484 SNAP receptor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0010274 hydrotropism IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001547 Glyco_hydro_5 101 337
No external refs found!