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  5. LOC_Os01g48910.2

LOC_Os01g48910.2


Description : Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana (sp|q9t0a0|lacs4_arath : 933.0) & Enzyme classification.EC_6 ligases.EC_6.2 ligase forming carbon-sulfur bond(50.6.2 : 452.8)


Gene families : OG0000625 (Archaeplastida) Phylogenetic Tree(s): OG0000625_tree ,
OG_05_0001883 (LandPlants) Phylogenetic Tree(s): OG_05_0001883_tree ,
OG_06_0001731 (SeedPlants) Phylogenetic Tree(s): OG_06_0001731_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g48910.2
Cluster HCCA: Cluster_287

Target Alias Description ECC score Gene Family Method Actions
AT1G49430 LRD2, LACS2 long-chain acyl-CoA synthetase 2 0.07 Archaeplastida
AT1G64400 LACS3 AMP-dependent synthetase and ligase family protein 0.02 Archaeplastida
AT2G47240 CER8, LACS1 AMP-dependent synthetase and ligase family protein 0.06 Archaeplastida
Gb_09959 No alias Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_32132 No alias Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Gb_32723 No alias Long chain acyl-CoA synthetase 6, peroxisomal... 0.04 Archaeplastida
MA_10432761g0010 No alias Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_839621g0010 No alias Long chain acyl-CoA synthetase 5 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Mp8g16310.1 No alias peroxisomal long-chain acyl-CoA synthetase 0.02 Archaeplastida
Pp3c12_20700V3.1 No alias AMP-dependent synthetase and ligase family protein 0.04 Archaeplastida
Solyc01g079240.3.1 No alias Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc01g099100.4.1 No alias peroxisomal long-chain acyl-CoA synthetase 0.03 Archaeplastida
Solyc01g109180.4.1 No alias Long chain acyl-CoA synthetase 2 OS=Arabidopsis thaliana... 0.08 Archaeplastida
Solyc08g082280.4.1 No alias Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc09g075770.3.1 No alias peroxisomal long-chain acyl-CoA synthetase 0.06 Archaeplastida
Zm00001e024608_P001 No alias Long chain acyl-CoA synthetase 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e036457_P004 No alias Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e040332_P001 No alias Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0004451 isocitrate lyase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Neighborhood
MF GO:0005347 ATP transmembrane transporter activity IEP Neighborhood
MF GO:0005471 ATP:ADP antiporter activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006862 nucleotide transport IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008514 organic anion transmembrane transporter activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0008897 holo-[acyl-carrier-protein] synthase activity IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
BP GO:0009617 response to bacterium IEP Neighborhood
BP GO:0009620 response to fungus IEP Neighborhood
MF GO:0015215 nucleotide transmembrane transporter activity IEP Neighborhood
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Neighborhood
MF GO:0015217 ADP transmembrane transporter activity IEP Neighborhood
MF GO:0015238 drug transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0015301 anion:anion antiporter activity IEP Neighborhood
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Neighborhood
BP GO:0015748 organophosphate ester transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016833 oxo-acid-lyase activity IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0042742 defense response to bacterium IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043207 response to external biotic stimulus IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0050832 defense response to fungus IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051704 multi-organism process IEP Neighborhood
BP GO:0051707 response to other organism IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:0098542 defense response to other organism IEP Neighborhood
MF GO:0099516 ion antiporter activity IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 70 531
No external refs found!