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  5. LOC_Os01g50840.1

LOC_Os01g50840.1


Description : proteolytic chalcone synthase regulator (KFB-CHS). component FBX of SCF E3 ubiquitin ligase complex


Gene families : OG0002547 (Archaeplastida) Phylogenetic Tree(s): OG0002547_tree ,
OG_05_0001676 (LandPlants) Phylogenetic Tree(s): OG_05_0001676_tree ,
OG_06_0010927 (SeedPlants) Phylogenetic Tree(s): OG_06_0010927_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g50840.1
Cluster HCCA: Cluster_344

Target Alias Description ECC score Gene Family Method Actions
MA_93698g0010 No alias component FBX of SCF E3 ubiquitin ligase complex 0.03 Archaeplastida
Pp3c2_14180V3.1 No alias Kelch repeat-containing F-box family protein 0.03 Archaeplastida
Solyc05g005150.1.1 No alias proteolytic chalcone synthase regulator (KFB-CHS).... 0.03 Archaeplastida
Zm00001e020033_P001 No alias proteolytic chalcone synthase regulator (KFB-CHS).... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!