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  5. LOC_Os01g52730.1

LOC_Os01g52730.1


Description : no hits & (original description: none)


Gene families : OG0000280 (Archaeplastida) Phylogenetic Tree(s): OG0000280_tree ,
OG_05_0000173 (LandPlants) Phylogenetic Tree(s): OG_05_0000173_tree ,
OG_06_0000123 (SeedPlants) Phylogenetic Tree(s): OG_06_0000123_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g52730.1
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
AT1G29640 No alias Protein of unknown function, DUF584 0.02 Archaeplastida
AT2G34340 No alias Protein of unknown function, DUF584 0.02 Archaeplastida
AT4G18980 AtS40-3 AtS40-3 0.02 Archaeplastida
AT5G03230 No alias Protein of unknown function, DUF584 0.02 Archaeplastida
AT5G45630 No alias Protein of unknown function, DUF584 0.02 Archaeplastida
GSVIVT01025190001 No alias No description available 0.06 Archaeplastida
LOC_Os04g43990.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10434437g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_54260g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Smo442846 No alias No description available 0.02 Archaeplastida
Solyc10g086110.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e007379_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e007566_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e012668_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e015167_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e027469_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e035102_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e039074_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e041249_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e041345_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004474 malate synthase activity IEP Neighborhood
MF GO:0004618 phosphoglycerate kinase activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006081 cellular aldehyde metabolic process IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006090 pyruvate metabolic process IEP Neighborhood
BP GO:0006096 glycolytic process IEP Neighborhood
BP GO:0006097 glyoxylate cycle IEP Neighborhood
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006757 ATP generation from ADP IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
BP GO:0009132 nucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009166 nucleotide catabolic process IEP Neighborhood
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Neighborhood
BP GO:0042866 pyruvate biosynthetic process IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0046031 ADP metabolic process IEP Neighborhood
BP GO:0046487 glyoxylate metabolic process IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
BP GO:0046939 nucleotide phosphorylation IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901292 nucleoside phosphate catabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR007608 Senescence_reg_S40 29 129
No external refs found!