1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os01g53240.1

LOC_Os01g53240.1


Description : BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica (sp|q942d4|burp3_orysj : 456.0)


Gene families : OG0000327 (Archaeplastida) Phylogenetic Tree(s): OG0000327_tree ,
OG_05_0000147 (LandPlants) Phylogenetic Tree(s): OG_05_0000147_tree ,
OG_06_0000380 (SeedPlants) Phylogenetic Tree(s): OG_06_0000380_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g53240.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00173800 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and... 0.03 Archaeplastida
AMTR_s00059p00088650 evm_27.TU.AmTr_v1... BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
AMTR_s00059p00097920 evm_27.TU.AmTr_v1... BURP domain protein RD22 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00059p00190970 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00059p00191030 evm_27.TU.AmTr_v1... BURP domain protein RD22 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00087p00099700 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00109p00021460 evm_27.TU.AmTr_v1... BURP domain protein RD22 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT1G70370 PG2 polygalacturonase 2 0.03 Archaeplastida
GSVIVT01013718001 No alias Polygalacturonase 1 beta-like protein 3 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01035703001 No alias BURP domain protein RD22 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_18274 No alias non-catalytic polygalacturonase regulator 0.02 Archaeplastida
Gb_32942 No alias non-catalytic polygalacturonase regulator 0.03 Archaeplastida
Gb_32944 No alias Polygalacturonase 1 beta-like protein 3 OS=Arabidopsis... 0.03 Archaeplastida
Gb_32947 No alias non-catalytic polygalacturonase regulator 0.03 Archaeplastida
Gb_39304 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.04 Archaeplastida
LOC_Os05g12400.1 No alias BURP domain-containing protein 1 OS=Oryza sativa subsp.... 0.07 Archaeplastida
LOC_Os05g12640.1 No alias BURP domain-containing protein 2 OS=Oryza sativa subsp.... 0.03 Archaeplastida
LOC_Os06g13240.1 No alias BURP domain-containing protein 9 OS=Oryza sativa subsp.... 0.03 Archaeplastida
LOC_Os06g19740.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_462957g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_577011g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_5913418g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_608446g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_63321g0010 No alias BURP domain protein RD22 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_7645347g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_8888577g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c13_16030V3.1 No alias polygalacturonase 2 0.03 Archaeplastida
Pp3c3_19890V3.1 No alias polygalacturonase 2 0.02 Archaeplastida
Solyc01g109500.4.1 No alias BURP domain protein USPL1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc05g015300.4.1 No alias BURP domain protein RD22 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc08g068130.1.1 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Solyc08g068140.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e003438_P003 No alias Protein RAFTIN 1A OS=Triticum aestivum... 0.03 Archaeplastida
Zm00001e003891_P006 No alias BURP domain-containing protein 11 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Zm00001e019897_P001 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Zm00001e022326_P001 No alias non-catalytic polygalacturonase regulator 0.02 Archaeplastida
Zm00001e029096_P002 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0010274 hydrotropism IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR004873 BURP_dom 212 426
No external refs found!