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  5. LOC_Os01g53650.1

LOC_Os01g53650.1


Description : mRNA-binding regulatory factor (TZF)


Gene families : OG0001103 (Archaeplastida) Phylogenetic Tree(s): OG0001103_tree ,
OG_05_0000849 (LandPlants) Phylogenetic Tree(s): OG_05_0000849_tree ,
OG_06_0000726 (SeedPlants) Phylogenetic Tree(s): OG_06_0000726_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g53650.1
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AT1G03790 SOM Zinc finger C-x8-C-x5-C-x3-H type family protein 0.07 Archaeplastida
AT5G07500 PEI1 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.05 Archaeplastida
Cre03.g146267 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.01 Archaeplastida
GSVIVT01013901001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 Archaeplastida
LOC_Os05g10670.1 No alias mRNA-binding regulatory factor (TZF) 0.04 Archaeplastida
Solyc07g053750.1.1 No alias mRNA-binding regulatory factor (TZF) 0.16 Archaeplastida
Solyc12g008660.1.1 No alias mRNA-binding regulatory factor (TZF) 0.01 Archaeplastida
Zm00001e027132_P001 No alias mRNA-binding regulatory factor (TZF) 0.04 Archaeplastida
Zm00001e027454_P001 No alias mRNA-binding regulatory factor (TZF) 0.02 Archaeplastida
Zm00001e031293_P001 No alias mRNA-binding regulatory factor (TZF) 0.02 Archaeplastida
Zm00001e032199_P001 No alias mRNA-binding regulatory factor (TZF) 0.14 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Neighborhood
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003872 6-phosphofructokinase activity IEP Neighborhood
CC GO:0005811 lipid droplet IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008443 phosphofructokinase activity IEP Neighborhood
BP GO:0009415 response to water IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009790 embryo development IEP Neighborhood
BP GO:0009793 embryo development ending in seed dormancy IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
CC GO:0012511 monolayer-surrounded lipid storage body IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0019200 carbohydrate kinase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!