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  5. LOC_Os01g55190.1

LOC_Os01g55190.1


Description : no hits & (original description: none)


Gene families : OG0000610 (Archaeplastida) Phylogenetic Tree(s): OG0000610_tree ,
OG_05_0009837 (LandPlants) Phylogenetic Tree(s): OG_05_0009837_tree ,
OG_06_0008063 (SeedPlants) Phylogenetic Tree(s): OG_06_0008063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g55190.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00042p00185900 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00141p00085330 evm_27.TU.AmTr_v1... No description available 0.07 Archaeplastida
AMTR_s00141p00087130 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00141p00087190 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00141p00103540 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT1G29980 No alias Protein of unknown function, DUF642 0.03 Archaeplastida
AT1G80240 No alias Protein of unknown function, DUF642 0.03 Archaeplastida
AT2G41800 No alias Protein of unknown function, DUF642 0.02 Archaeplastida
AT3G08030 No alias Protein of unknown function, DUF642 0.04 Archaeplastida
AT4G32460 No alias Protein of unknown function, DUF642 0.05 Archaeplastida
AT5G11420 No alias Protein of unknown function, DUF642 0.06 Archaeplastida
AT5G25460 No alias Protein of unknown function, DUF642 0.04 Archaeplastida
GSVIVT01033098001 No alias No description available 0.03 Archaeplastida
GSVIVT01033286001 No alias No description available 0.03 Archaeplastida
Gb_04470 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_11177 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_14930 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g34690.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g41710.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10434741g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10435058g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_109913g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_770477g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_89188g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_9589g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc02g070540.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc03g120040.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g067910.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc08g067030.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc12g042930.2.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e006089_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e007711_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e007712_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e019773_P002 No alias no hits & (original description: none) 0.09 Archaeplastida
Zm00001e020676_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e029029_P001 No alias no hits & (original description: none) 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006946 DUF642 205 371
IPR006946 DUF642 35 193
No external refs found!