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  5. LOC_Os01g55200.1

LOC_Os01g55200.1


Description : voltage-gated potassium cation channel (AKT/SKOR/GORK)


Gene families : OG0000231 (Archaeplastida) Phylogenetic Tree(s): OG0000231_tree ,
OG_05_0000429 (LandPlants) Phylogenetic Tree(s): OG_05_0000429_tree ,
OG_06_0001077 (SeedPlants) Phylogenetic Tree(s): OG_06_0001077_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g55200.1
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AT2G26650 ATAKT1, AKT1, KT1 K+ transporter 1 0.02 Archaeplastida
AT5G46240 KAT1 potassium channel in Arabidopsis thaliana 1 0.03 Archaeplastida
GSVIVT01030679001 No alias Potassium channel SKOR OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os04g36740.1 No alias voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.04 Archaeplastida
MA_7331g0010 No alias voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.03 Archaeplastida
MA_82222g0010 No alias voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.03 Archaeplastida
Zm00001e029028_P001 No alias voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004556 alpha-amylase activity IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000595 cNMP-bd_dom 401 486
IPR005821 Ion_trans_dom 64 310
No external refs found!