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  5. LOC_Os01g58750.1

LOC_Os01g58750.1


Description : no hits & (original description: none)


Gene families : OG0003661 (Archaeplastida) Phylogenetic Tree(s): OG0003661_tree ,
OG_05_0003088 (LandPlants) Phylogenetic Tree(s): OG_05_0003088_tree ,
OG_06_0009797 (SeedPlants) Phylogenetic Tree(s): OG_06_0009797_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g58750.1
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
AT5G62270 No alias BEST Arabidopsis thaliana protein match is:... 0.03 Archaeplastida
Cre06.g254600 No alias No description available 0.03 Archaeplastida
Mp4g05070.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c23_9160V3.1 No alias No annotation 0.03 Archaeplastida
Zm00001e019545_P002 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006480 N-terminal protein amino acid methylation IEP Neighborhood
MF GO:0008097 5S rRNA binding IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
MF GO:0016289 CoA hydrolase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0031365 N-terminal protein amino acid modification IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032977 membrane insertase activity IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
CC GO:1905354 exoribonuclease complex IEP Neighborhood
InterPro domains Description Start Stop
IPR024388 Ribosomal_L20_mt 125 186
No external refs found!