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Description : PAP6/FLN1 cofactor of plastid-encoded RNA polymerase
Gene families : OG0000505 (Archaeplastida) Phylogenetic Tree(s): OG0000505_tree ,
OG_05_0006095 (LandPlants) Phylogenetic Tree(s): OG_05_0006095_tree ,
OG_06_0009885 (SeedPlants) Phylogenetic Tree(s): OG_06_0009885_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os01g63220.2 | |
| Cluster | HCCA: Cluster_351 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G54090 | FLN1 | fructokinase-like 1 | 0.05 | Archaeplastida | |
| Gb_05959 | No alias | PAP6/FLN1 cofactor of plastid-encoded RNA polymerase | 0.04 | Archaeplastida | |
| Gb_07834 | No alias | PAP6/FLN1 cofactor of plastid-encoded RNA polymerase | 0.02 | Archaeplastida | |
| Gb_38659 | No alias | PAP6/FLN1 cofactor of plastid-encoded RNA polymerase | 0.02 | Archaeplastida | |
| MA_10430836g0010 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
| MA_175363g0010 | No alias | Fructokinase-like 1, chloroplastic OS=Arabidopsis... | 0.02 | Archaeplastida | |
| MA_659042g0010 | No alias | PAP6/FLN1 cofactor of plastid-encoded RNA polymerase | 0.03 | Archaeplastida | |
| Mp7g17740.1 | No alias | PAP6/FLN1 cofactor of plastid-encoded RNA polymerase | 0.04 | Archaeplastida | |
| Pp3c13_6840V3.1 | No alias | fructokinase-like 1 | 0.02 | Archaeplastida | |
| Solyc02g091490.4.1 | No alias | fructose kinase | 0.04 | Archaeplastida | |
| Solyc09g011850.4.1 | No alias | PAP6/FLN1 cofactor of plastid-encoded RNA polymerase | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Neighborhood |
| MF | GO:0004559 | alpha-mannosidase activity | IEP | Neighborhood |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Neighborhood |
| MF | GO:0005543 | phospholipid binding | IEP | Neighborhood |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Neighborhood |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | Neighborhood |
| BP | GO:0006013 | mannose metabolic process | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006353 | DNA-templated transcription, termination | IEP | Neighborhood |
| BP | GO:0006399 | tRNA metabolic process | IEP | Neighborhood |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Neighborhood |
| BP | GO:0006520 | cellular amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| MF | GO:0008289 | lipid binding | IEP | Neighborhood |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015297 | antiporter activity | IEP | Neighborhood |
| MF | GO:0015923 | mannosidase activity | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Neighborhood |
| MF | GO:0016874 | ligase activity | IEP | Neighborhood |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Neighborhood |
| BP | GO:0019318 | hexose metabolic process | IEP | Neighborhood |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Neighborhood |
| MF | GO:0042910 | xenobiotic transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0043038 | amino acid activation | IEP | Neighborhood |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
| BP | GO:0044281 | small molecule metabolic process | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011611 | PfkB_dom | 192 | 503 |
| No external refs found! |