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  5. LOC_Os01g65460.1

LOC_Os01g65460.1


Description : 1,2-beta-galactosidase. beta-galactosidase (BGAL)


Gene families : OG0000133 (Archaeplastida) Phylogenetic Tree(s): OG0000133_tree ,
OG_05_0000245 (LandPlants) Phylogenetic Tree(s): OG_05_0000245_tree ,
OG_06_0008879 (SeedPlants) Phylogenetic Tree(s): OG_06_0008879_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g65460.1
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00246870 evm_27.TU.AmTr_v1... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.04 Archaeplastida
AMTR_s00138p00054750 evm_27.TU.AmTr_v1... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 Archaeplastida
AT2G28470 BGAL8 beta-galactosidase 8 0.04 Archaeplastida
GSVIVT01009791001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 Archaeplastida
GSVIVT01018853001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 Archaeplastida
GSVIVT01024031001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 Archaeplastida
GSVIVT01025170001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.04 Archaeplastida
Gb_32359 No alias beta-galactosidase (BGAL) 0.03 Archaeplastida
Gb_39826 No alias Beta-galactosidase 6 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os06g37560.1 No alias beta-galactosidase (BGAL) 0.05 Archaeplastida
LOC_Os12g24170.1 No alias beta-galactosidase (BGAL) 0.05 Archaeplastida
MA_10427427g0010 No alias beta-galactosidase (BGAL) 0.03 Archaeplastida
MA_19375g0010 No alias beta-galactosidase (BGAL) 0.03 Archaeplastida
MA_87238g0010 No alias beta-galactosidase (BGAL) 0.02 Archaeplastida
Solyc02g078950.4.1 No alias beta-galactosidase (BGAL) 0.02 Archaeplastida
Solyc02g084720.3.1 No alias beta-galactosidase (BGAL) 0.02 Archaeplastida
Solyc06g062580.3.1 No alias beta-galactosidase (BGAL) 0.05 Archaeplastida
Zm00001e018433_P002 No alias beta-galactosidase (BGAL) 0.02 Archaeplastida
Zm00001e019096_P001 No alias 1,2-beta-galactosidase. beta-galactosidase (BGAL) 0.03 Archaeplastida
Zm00001e019098_P002 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e019099_P001 No alias beta-galactosidase (BGAL) 0.02 Archaeplastida
Zm00001e020528_P001 No alias beta-galactosidase (BGAL) 0.04 Archaeplastida
Zm00001e035986_P002 No alias beta-galactosidase (BGAL) 0.03 Archaeplastida
Zm00001e037281_P001 No alias beta-galactosidase (BGAL) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0019321 pentose metabolic process IEP Neighborhood
BP GO:0019566 arabinose metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0046373 L-arabinose metabolic process IEP Neighborhood
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR031330 Gly_Hdrlase_35_cat 112 417
IPR000922 Lectin_gal-bd_dom 841 918
No external refs found!