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Description : transcription factor (TCP). TCP20 circadian clock activation factor
Gene families : OG0000415 (Archaeplastida) Phylogenetic Tree(s): OG0000415_tree ,
OG_05_0000215 (LandPlants) Phylogenetic Tree(s): OG_05_0000215_tree ,
OG_06_0000299 (SeedPlants) Phylogenetic Tree(s): OG_06_0000299_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os01g69980.1 | |
| Cluster | HCCA: Cluster_292 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00040760 | evm_27.TU.AmTr_v1... | Multi-process regulation.circadian clock.morning element... | 0.03 | Archaeplastida | |
| AT2G45680 | No alias | TCP family transcription factor | 0.03 | Archaeplastida | |
| AT3G47620 | AtTCP14, TCP14 | TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 | 0.04 | Archaeplastida | |
| AT5G51910 | No alias | TCP family transcription factor | 0.02 | Archaeplastida | |
| MA_81710g0010 | No alias | transcription factor (TCP) | 0.03 | Archaeplastida | |
| Pp3c3_24660V3.1 | No alias | TCP family transcription factor | 0.02 | Archaeplastida | |
| Solyc05g007420.2.1 | No alias | transcription factor (TCP) | 0.02 | Archaeplastida | |
| Solyc08g080150.1.1 | No alias | transcription factor (TCP) | 0.04 | Archaeplastida | |
| Solyc11g020670.1.1 | No alias | transcription factor (TCP) | 0.04 | Archaeplastida | |
| Zm00001e003744_P001 | No alias | transcription factor (TCP) | 0.02 | Archaeplastida | |
| Zm00001e010190_P001 | No alias | transcription factor (TCP) | 0.02 | Archaeplastida | |
| Zm00001e015209_P001 | No alias | transcription factor (TCP). CHE circadian clock repression factor | 0.03 | Archaeplastida | |
| Zm00001e016271_P001 | No alias | transcription factor (TCP). CHE circadian clock repression factor | 0.03 | Archaeplastida | |
| Zm00001e018800_P001 | No alias | transcription factor (TCP). TCP20 circadian clock... | 0.02 | Archaeplastida | |
| Zm00001e028426_P001 | No alias | transcription factor (TCP). TCP20 circadian clock... | 0.02 | Archaeplastida | |
| Zm00001e036117_P001 | No alias | transcription factor (TCP) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000786 | nucleosome | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0004852 | uroporphyrinogen-III synthase activity | IEP | Neighborhood |
| BP | GO:0006325 | chromatin organization | IEP | Neighborhood |
| BP | GO:0006334 | nucleosome assembly | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| MF | GO:0016829 | lyase activity | IEP | Neighborhood |
| MF | GO:0016836 | hydro-lyase activity | IEP | Neighborhood |
| MF | GO:0016846 | carbon-sulfur lyase activity | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| CC | GO:0032993 | protein-DNA complex | IEP | Neighborhood |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Neighborhood |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Neighborhood |
| CC | GO:0033643 | host cell part | IEP | Neighborhood |
| CC | GO:0033646 | host intracellular part | IEP | Neighborhood |
| CC | GO:0033647 | host intracellular organelle | IEP | Neighborhood |
| CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | Neighborhood |
| BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Neighborhood |
| BP | GO:0034728 | nucleosome organization | IEP | Neighborhood |
| CC | GO:0042025 | host cell nucleus | IEP | Neighborhood |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Neighborhood |
| CC | GO:0044217 | other organism part | IEP | Neighborhood |
| CC | GO:0044815 | DNA packaging complex | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Neighborhood |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | Neighborhood |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR017887 | TF_TCP_subgr | 86 | 172 |
| No external refs found! |