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  5. AMTR_s00002p00254680

AMTR_s00002p00254680 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.386

No description available


Gene families : OG0000094 (Archaeplastida) Phylogenetic Tree(s): OG0000094_tree ,
OG_05_0000055 (LandPlants) Phylogenetic Tree(s): OG_05_0000055_tree ,
OG_06_0000264 (SeedPlants) Phylogenetic Tree(s): OG_06_0000264_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00254680
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00253850 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AT4G34680 GATA3 GATA transcription factor 3 0.03 Archaeplastida
AT5G26930 GATA23 GATA transcription factor 23 0.02 Archaeplastida
GSVIVT01024194001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
Gb_06864 No alias transcription factor (GATA) 0.03 Archaeplastida
Gb_25531 No alias transcription factor (GATA) 0.04 Archaeplastida
Gb_25568 No alias transcription factor (GATA) 0.02 Archaeplastida
Gb_34837 No alias transcription factor (GATA) 0.03 Archaeplastida
LOC_Os02g12790.1 No alias transcription factor (GATA) 0.05 Archaeplastida
LOC_Os02g56250.1 No alias transcription factor (GATA) 0.03 Archaeplastida
LOC_Os06g37450.1 No alias transcription factor (GATA) 0.03 Archaeplastida
LOC_Os09g08150.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g32070.1 No alias transcription factor (GATA) 0.02 Archaeplastida
LOC_Os12g42970.1 No alias transcription factor (GATA) 0.05 Archaeplastida
Zm00001e014466_P002 No alias transcription factor (GATA) 0.03 Archaeplastida
Zm00001e039467_P001 No alias transcription factor (GATA) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003913 DNA photolyase activity IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
BP GO:0016999 antibiotic metabolic process IEP Neighborhood
BP GO:0017000 antibiotic biosynthetic process IEP Neighborhood
BP GO:0019748 secondary metabolic process IEP Neighborhood
BP GO:0030653 beta-lactam antibiotic metabolic process IEP Neighborhood
BP GO:0030654 beta-lactam antibiotic biosynthetic process IEP Neighborhood
BP GO:0042316 penicillin metabolic process IEP Neighborhood
BP GO:0042318 penicillin biosynthetic process IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0044550 secondary metabolite biosynthetic process IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0072338 cellular lactam metabolic process IEP Neighborhood
BP GO:0072339 cellular lactam biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!