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  5. AMTR_s00002p00255260

AMTR_s00002p00255260 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.391

No description available


Gene families : OG0000568 (Archaeplastida) Phylogenetic Tree(s): OG0000568_tree ,
OG_05_0000947 (LandPlants) Phylogenetic Tree(s): OG_05_0000947_tree ,
OG_06_0001473 (SeedPlants) Phylogenetic Tree(s): OG_06_0001473_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00255260
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AT5G24790 No alias Protein of unknown function, DUF599 0.02 Archaeplastida
GSVIVT01014262001 No alias Photosynthesis.photophosphorylation.photosystem... 0.03 Archaeplastida
GSVIVT01021129001 No alias Flavonoid 4-O-methyltransferase OS=Glycine max 0.04 Archaeplastida
LOC_Os09g32100.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_879701g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp1g10490.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc02g077540.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc08g006100.4.1 No alias No annotation 0.02 Archaeplastida
Solyc12g040460.2.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003840 obsolete gamma-glutamyltransferase activity IEP Neighborhood
MF GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity IEP Neighborhood
BP GO:0006575 cellular modified amino acid metabolic process IEP Neighborhood
BP GO:0006749 glutathione metabolic process IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
BP GO:0009108 coenzyme biosynthetic process IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0015939 pantothenate metabolic process IEP Neighborhood
BP GO:0015940 pantothenate biosynthetic process IEP Neighborhood
MF GO:0016597 amino acid binding IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0031406 carboxylic acid binding IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Neighborhood
MF GO:0043177 organic acid binding IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006747 DUF599 10 227
No external refs found!