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  5. LOC_Os01g74146.1

LOC_Os01g74146.1


Description : CDH1-type (APC/C)-dependent ubiquitination activator protein


Gene families : OG0000394 (Archaeplastida) Phylogenetic Tree(s): OG0000394_tree ,
OG_05_0001854 (LandPlants) Phylogenetic Tree(s): OG_05_0001854_tree ,
OG_06_0001931 (SeedPlants) Phylogenetic Tree(s): OG_06_0001931_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g74146.1
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00114780 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.metaphase to anaphase... 0.03 Archaeplastida
AMTR_s00012p00242760 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.metaphase to anaphase... 0.14 Archaeplastida
AMTR_s00126p00091330 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.metaphase to anaphase... 0.03 Archaeplastida
AT4G33260 CDC20.2 Transducin family protein / WD-40 repeat family protein 0.1 Archaeplastida
AT4G33270 CDC20.1 Transducin family protein / WD-40 repeat family protein 0.09 Archaeplastida
AT5G13840 FZR3 FIZZY-related 3 0.03 Archaeplastida
Cre09.g399911 No alias Cell cycle.mitosis and meiosis.metaphase to anaphase... 0.07 Archaeplastida
Gb_41288 No alias CDH1-type (APC/C)-dependent ubiquitination activator protein 0.04 Archaeplastida
MA_10290598g0010 No alias CDH1-type (APC/C)-dependent ubiquitination activator protein 0.18 Archaeplastida
Mp3g00030.1 No alias CDC20-type (APC/C)-dependent ubiquitination activator protein 0.15 Archaeplastida
Pp3c12_23740V3.1 No alias FIZZY-related 2 0.06 Archaeplastida
Pp3c21_3130V3.1 No alias Transducin family protein / WD-40 repeat family protein 0.03 Archaeplastida
Pp3c21_3140V3.1 No alias Transducin family protein / WD-40 repeat family protein 0.03 Archaeplastida
Pp3c8_6330V3.1 No alias Transducin family protein / WD-40 repeat family protein 0.07 Archaeplastida
Smo92939 No alias Cell cycle.mitosis and meiosis.metaphase to anaphase... 0.04 Archaeplastida
Solyc03g096870.3.1 No alias CDC20-type (APC/C)-dependent ubiquitination activator protein 0.06 Archaeplastida
Solyc06g043150.4.1 No alias Protein FIZZY-RELATED 3 OS=Arabidopsis thaliana... 0.11 Archaeplastida
Solyc06g072830.4.1 No alias CDC20-type (APC/C)-dependent ubiquitination activator protein 0.17 Archaeplastida
Zm00001e018501_P001 No alias CDH1-type (APC/C)-dependent ubiquitination activator protein 0.27 Archaeplastida
Zm00001e023310_P002 No alias CDC20-type (APC/C)-dependent ubiquitination activator protein 0.15 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
CC GO:0000775 chromosome, centromeric region IEP Neighborhood
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
BP GO:0006270 DNA replication initiation IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
BP GO:0007059 chromosome segregation IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0045132 meiotic chromosome segregation IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
CC GO:0098687 chromosomal region IEP Neighborhood
BP GO:0098813 nuclear chromosome segregation IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903046 meiotic cell cycle process IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 288 323
IPR001680 WD40_repeat 417 453
IPR001680 WD40_repeat 328 368
No external refs found!