1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os02g03030.1

LOC_Os02g03030.1


Description : class IV histone methyltransferase component of histone lysine methylation/demethylation


Gene families : OG0003291 (Archaeplastida) Phylogenetic Tree(s): OG0003291_tree ,
OG_05_0003038 (LandPlants) Phylogenetic Tree(s): OG_05_0003038_tree ,
OG_06_0003237 (SeedPlants) Phylogenetic Tree(s): OG_06_0003237_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g03030.1
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01038589001 No alias Chromatin organisation.histone modifications.histone... 0.03 Archaeplastida
MA_73622g0010 No alias class IV histone methyltransferase component of histone... 0.02 Archaeplastida
Mp5g03760.1 No alias class IV histone methyltransferase component of histone... 0.03 Archaeplastida
Solyc03g082860.3.1 No alias class IV histone methyltransferase component of histone... 0.04 Archaeplastida
Zm00001e013505_P001 No alias class IV histone methyltransferase component of histone... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0007062 sister chromatid cohesion IEP Neighborhood
BP GO:0007064 mitotic sister chromatid cohesion IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
CC GO:0031390 Ctf18 RFC-like complex IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 34 80
No external refs found!