Coexpression cluster: Cluster_173 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006259 DNA metabolic process 10.34% (12/116) 4.38 0.0 0.0
GO:0006270 DNA replication initiation 3.45% (4/116) 7.05 0.0 2e-06
GO:0090304 nucleic acid metabolic process 10.34% (12/116) 2.89 0.0 8e-06
GO:0006139 nucleobase-containing compound metabolic process 11.21% (13/116) 2.64 0.0 1.1e-05
GO:0006725 cellular aromatic compound metabolic process 11.21% (13/116) 2.5 1e-06 2.4e-05
GO:0046483 heterocycle metabolic process 11.21% (13/116) 2.52 0.0 2.5e-05
GO:1901360 organic cyclic compound metabolic process 11.21% (13/116) 2.47 1e-06 2.6e-05
GO:0051716 cellular response to stimulus 5.17% (6/116) 4.03 2e-06 4.7e-05
GO:0006974 cellular response to DNA damage stimulus 5.17% (6/116) 4.03 2e-06 4.7e-05
GO:0033554 cellular response to stress 5.17% (6/116) 4.03 2e-06 4.7e-05
GO:0044427 chromosomal part 4.31% (5/116) 4.62 2e-06 6.3e-05
GO:0106068 SUMO ligase complex 1.72% (2/116) 8.51 7e-06 0.000145
GO:0030915 Smc5-Smc6 complex 1.72% (2/116) 8.51 7e-06 0.000145
GO:0034641 cellular nitrogen compound metabolic process 11.21% (13/116) 2.05 1.6e-05 0.000287
GO:0008017 microtubule binding 3.45% (4/116) 4.7 1.8e-05 0.0003
GO:0015631 tubulin binding 3.45% (4/116) 4.51 3e-05 0.000478
GO:0003677 DNA binding 9.48% (11/116) 2.11 5.4e-05 0.000794
GO:0006260 DNA replication 2.59% (3/116) 5.18 7.8e-05 0.001033
GO:1903047 mitotic cell cycle process 1.72% (2/116) 7.18 7.5e-05 0.001044
GO:0005524 ATP binding 12.93% (15/116) 1.62 0.000109 0.001379
GO:0008092 cytoskeletal protein binding 3.45% (4/116) 3.95 0.000137 0.00164
GO:0008144 drug binding 12.93% (15/116) 1.55 0.00019 0.002173
GO:0009987 cellular process 20.69% (24/116) 1.09 0.000279 0.003052
GO:0035639 purine ribonucleoside triphosphate binding 12.93% (15/116) 1.48 0.00031 0.003256
GO:0003887 DNA-directed DNA polymerase activity 1.72% (2/116) 6.18 0.000332 0.003351
GO:0034061 DNA polymerase activity 1.72% (2/116) 5.92 0.000486 0.004373
GO:0006950 response to stress 5.17% (6/116) 2.62 0.000471 0.004398
GO:0006281 DNA repair 3.45% (4/116) 3.5 0.000458 0.004443
GO:1901265 nucleoside phosphate binding 14.66% (17/116) 1.24 0.000843 0.00708
GO:0000166 nucleotide binding 14.66% (17/116) 1.24 0.000843 0.00708
GO:0022402 cell cycle process 1.72% (2/116) 5.51 0.000877 0.007129
GO:0030554 adenyl nucleotide binding 12.93% (15/116) 1.28 0.001301 0.009642
GO:0032559 adenyl ribonucleotide binding 12.93% (15/116) 1.28 0.001278 0.009761
GO:0036094 small molecule binding 14.66% (17/116) 1.18 0.001258 0.009904
GO:0005667 transcription factor complex 1.72% (2/116) 5.11 0.001521 0.010951
GO:0044260 cellular macromolecule metabolic process 13.79% (16/116) 1.19 0.001643 0.011503
GO:0044424 intracellular part 8.62% (10/116) 1.61 0.00172 0.011711
GO:0050896 response to stimulus 5.17% (6/116) 2.21 0.002002 0.013274
GO:0006323 DNA packaging 0.86% (1/116) 8.51 0.00275 0.013325
GO:0007076 mitotic chromosome condensation 0.86% (1/116) 8.51 0.00275 0.013325
GO:0045005 DNA-dependent DNA replication maintenance of fidelity 0.86% (1/116) 8.51 0.00275 0.013325
GO:0048478 replication fork protection 0.86% (1/116) 8.51 0.00275 0.013325
GO:0000796 condensin complex 0.86% (1/116) 8.51 0.00275 0.013325
GO:2000104 negative regulation of DNA-dependent DNA replication 0.86% (1/116) 8.51 0.00275 0.013325
GO:0090329 regulation of DNA-dependent DNA replication 0.86% (1/116) 8.51 0.00275 0.013325
GO:0008156 negative regulation of DNA replication 0.86% (1/116) 8.51 0.00275 0.013325
GO:0030261 chromosome condensation 0.86% (1/116) 8.51 0.00275 0.013325
GO:0051053 negative regulation of DNA metabolic process 0.86% (1/116) 8.51 0.00275 0.013325
GO:0017076 purine nucleotide binding 12.93% (15/116) 1.16 0.002804 0.013334
GO:0005488 binding 30.17% (35/116) 0.65 0.002933 0.01344
GO:0032553 ribonucleotide binding 12.93% (15/116) 1.16 0.002893 0.013499
GO:0097367 carbohydrate derivative binding 12.93% (15/116) 1.15 0.003041 0.013683
GO:0044464 cell part 8.62% (10/116) 1.55 0.00229 0.014797
GO:0044422 organelle part 4.31% (5/116) 2.43 0.002488 0.015295
GO:0044446 intracellular organelle part 4.31% (5/116) 2.43 0.002488 0.015295
GO:0003676 nucleic acid binding 10.34% (12/116) 1.3 0.003545 0.015672
GO:0032555 purine ribonucleotide binding 12.93% (15/116) 1.17 0.002697 0.016184
GO:0045934 negative regulation of nucleobase-containing compound metabolic process 0.86% (1/116) 7.51 0.005492 0.021623
GO:0051301 cell division 0.86% (1/116) 7.51 0.005492 0.021623
GO:0031390 Ctf18 RFC-like complex 0.86% (1/116) 7.51 0.005492 0.021623
GO:0007064 mitotic sister chromatid cohesion 0.86% (1/116) 7.51 0.005492 0.021623
GO:0007062 sister chromatid cohesion 0.86% (1/116) 7.51 0.005492 0.021623
GO:0009263 deoxyribonucleotide biosynthetic process 0.86% (1/116) 7.51 0.005492 0.021623
GO:0006275 regulation of DNA replication 0.86% (1/116) 7.51 0.005492 0.021623
GO:0006325 chromatin organization 1.72% (2/116) 3.86 0.008424 0.026207
GO:0031570 DNA integrity checkpoint 0.86% (1/116) 6.92 0.008226 0.02624
GO:0007059 chromosome segregation 0.86% (1/116) 6.92 0.008226 0.02624
GO:0000077 DNA damage checkpoint 0.86% (1/116) 6.92 0.008226 0.02624
GO:0009262 deoxyribonucleotide metabolic process 0.86% (1/116) 6.92 0.008226 0.02624
GO:0051052 regulation of DNA metabolic process 0.86% (1/116) 6.92 0.008226 0.02624
GO:0000776 kinetochore 0.86% (1/116) 6.92 0.008226 0.02624
GO:0031262 Ndc80 complex 0.86% (1/116) 6.92 0.008226 0.02624
GO:0008270 zinc ion binding 4.31% (5/116) 2.01 0.008389 0.026426
GO:0043168 anion binding 12.93% (15/116) 1.02 0.007072 0.027418
GO:0003777 microtubule motor activity 1.72% (2/116) 3.95 0.007473 0.027695
GO:0006928 movement of cell or subcellular component 1.72% (2/116) 3.95 0.007473 0.027695
GO:0007018 microtubule-based movement 1.72% (2/116) 3.95 0.007473 0.027695
GO:0032991 protein-containing complex 6.03% (7/116) 1.63 0.007826 0.028174
GO:0016043 cellular component organization 3.45% (4/116) 2.36 0.007986 0.028346
GO:0048523 negative regulation of cellular process 1.72% (2/116) 3.89 0.008101 0.028354
GO:1990234 transferase complex 1.72% (2/116) 3.92 0.007784 0.02843
GO:0005515 protein binding 12.07% (14/116) 0.99 0.010753 0.033047
GO:0000075 cell cycle checkpoint 0.86% (1/116) 6.51 0.010953 0.033256
GO:0007017 microtubule-based process 1.72% (2/116) 3.65 0.011206 0.033617
GO:0071840 cellular component organization or biogenesis 3.45% (4/116) 2.18 0.011974 0.035499
GO:0003774 motor activity 1.72% (2/116) 3.58 0.012339 0.036158
GO:0097159 organic cyclic compound binding 18.97% (22/116) 0.71 0.013239 0.03791
GO:1901363 heterocyclic compound binding 18.97% (22/116) 0.71 0.013239 0.03791
GO:0048519 negative regulation of biological process 1.72% (2/116) 3.46 0.014335 0.04059
GO:0006807 nitrogen compound metabolic process 15.52% (18/116) 0.8 0.014736 0.04126
GO:0043170 macromolecule metabolic process 14.66% (17/116) 0.82 0.015236 0.041733
GO:0043167 ion binding 16.38% (19/116) 0.77 0.015082 0.041765
GO:0044237 cellular metabolic process 14.66% (17/116) 0.79 0.017902 0.048509
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_22 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_31 0.026 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_49 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_57 0.034 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_58 0.051 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_110 0.095 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_124 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_152 0.032 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_168 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_172 0.044 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_40 0.027 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_44 0.051 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_60 0.094 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_116 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_122 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_128 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_158 0.042 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_190 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_255 0.023 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_24 0.028 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_46 0.06 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_155 0.033 Archaeplastida Compare
Gingko biloba HCCA Cluster_22 0.09 Archaeplastida Compare
Gingko biloba HCCA Cluster_54 0.039 Archaeplastida Compare
Gingko biloba HCCA Cluster_188 0.091 Archaeplastida Compare
Gingko biloba HCCA Cluster_264 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_314 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_335 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_1 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_15 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_115 0.145 Archaeplastida Compare
Zea mays HCCA Cluster_171 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_175 0.059 Archaeplastida Compare
Zea mays HCCA Cluster_234 0.034 Archaeplastida Compare
Zea mays HCCA Cluster_250 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_277 0.043 Archaeplastida Compare
Zea mays HCCA Cluster_309 0.029 Archaeplastida Compare
Zea mays HCCA Cluster_313 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_344 0.054 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_3 0.108 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_69 0.058 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_84 0.046 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_116 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_149 0.024 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_167 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_3 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_6 0.044 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_7 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_117 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_121 0.038 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_154 0.035 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_184 0.033 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_218 0.047 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_235 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_287 0.029 Archaeplastida Compare
Picea abies HCCA Cluster_76 0.033 Archaeplastida Compare
Picea abies HCCA Cluster_93 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_104 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_169 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_192 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_194 0.112 Archaeplastida Compare
Picea abies HCCA Cluster_202 0.036 Archaeplastida Compare
Picea abies HCCA Cluster_335 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_360 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_376 0.04 Archaeplastida Compare
Picea abies HCCA Cluster_379 0.075 Archaeplastida Compare
Picea abies HCCA Cluster_474 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_87 0.043 Archaeplastida Compare
Oryza sativa HCCA Cluster_136 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_229 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_335 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_357 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_3 0.028 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_29 0.025 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_137 0.026 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_204 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_22 0.031 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_35 0.064 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_38 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_58 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_77 0.102 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_139 0.051 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_195 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_241 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_272 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_281 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_26 0.035 Archaeplastida Compare
Vitis vinifera HCCA Cluster_48 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_53 0.129 Archaeplastida Compare
Vitis vinifera HCCA Cluster_95 0.028 Archaeplastida Compare
Vitis vinifera HCCA Cluster_100 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_121 0.033 Archaeplastida Compare
Vitis vinifera HCCA Cluster_123 0.04 Archaeplastida Compare
Vitis vinifera HCCA Cluster_186 0.043 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_10 0.05 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_63 0.056 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_88 0.027 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_110 0.038 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_112 0.028 Archaeplastida Compare
Sequences (116) (download table)

InterPro Domains

GO Terms

Family Terms