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  5. LOC_Os02g08390.1

LOC_Os02g08390.1


Description : no hits & (original description: none)


Gene families : OG0000686 (Archaeplastida) Phylogenetic Tree(s): OG0000686_tree ,
OG_05_0000403 (LandPlants) Phylogenetic Tree(s): OG_05_0000403_tree ,
OG_06_0000181 (SeedPlants) Phylogenetic Tree(s): OG_06_0000181_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g08390.1
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g24660.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os02g34010.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os03g62460.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g01840.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g03030.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g05590.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g08130.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os04g13600.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g14250.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g29224.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g37870.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g49070.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g23770.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g25020.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g48530.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g16690.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g23940.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os06g33070.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g36420.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g41470.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g49560.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g22860.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g30550.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g35210.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g42020.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g45890.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os08g05390.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g36260.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g44990.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os10g14260.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g08770.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g30440.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g43080.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os12g13200.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g25340.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os12g39740.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000930 gamma-tubulin complex IEP Neighborhood
CC GO:0000931 gamma-tubulin large complex IEP Neighborhood
BP GO:0006417 regulation of translation IEP Neighborhood
CC GO:0008274 gamma-tubulin ring complex IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
BP GO:0017148 negative regulation of translation IEP Neighborhood
MF GO:0030597 RNA glycosylase activity IEP Neighborhood
MF GO:0030598 rRNA N-glycosylase activity IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031503 protein-containing complex localization IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0033566 gamma-tubulin complex localization IEP Neighborhood
BP GO:0034248 regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0034629 cellular protein-containing complex localization IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044450 microtubule organizing center part IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051248 negative regulation of protein metabolic process IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
MF GO:0140102 catalytic activity, acting on a rRNA IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!