1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os02g09060.1

LOC_Os02g09060.1


Description : RING-H2-class E3 ligase


Gene families : OG0002694 (Archaeplastida) Phylogenetic Tree(s): OG0002694_tree ,
OG_05_0003072 (LandPlants) Phylogenetic Tree(s): OG_05_0003072_tree ,
OG_06_0003423 (SeedPlants) Phylogenetic Tree(s): OG_06_0003423_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g09060.1
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
Solyc07g008050.4.1 No alias RING-H2-class E3 ligase 0.07 Archaeplastida
Zm00001e013868_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003729 mRNA binding IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
CC GO:0005685 U1 snRNP IEP Neighborhood
BP GO:0006376 mRNA splice site selection IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0017006 protein-tetrapyrrole linkage IEP Neighborhood
BP GO:0017007 protein-bilin linkage IEP Neighborhood
BP GO:0017009 protein-phycocyanobilin linkage IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0022618 ribonucleoprotein complex assembly IEP Neighborhood
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Neighborhood
CC GO:0097525 spliceosomal snRNP complex IEP Neighborhood
CC GO:0120114 Sm-like protein family complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 163 204
IPR001607 Znf_UBP 215 274
IPR011422 BRAP2 55 151
No external refs found!