LOC_Os02g09590.1

Description : component mtRPS21|psRPS21 of mitochondrial ribosome small ribosomal subunit proteome. component psRPS21|mtRPS21 of small ribosomal subunit proteome

Gene families : OG0005199 (Archaeplastida) Phylogenetic Tree(s): OG0005199_tree ,
OG_05_0004877 (LandPlants) Phylogenetic Tree(s): OG_05_0004877_tree ,
OG_06_0007669 (SeedPlants) Phylogenetic Tree(s): OG_06_0007669_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os02g09590.1
Cluster	HCCA: Cluster_90

Target	Alias	Description	ECC score	Gene Family Method
AT3G27160	GHS1	Ribosomal protein S21 family protein	0.1	Archaeplastida
Cpa\|evm.model.tig00000863.30	No alias	Protein biosynthesis.organelle translation...	0.02	Archaeplastida
MA_249305g0010	No alias	component mtRPS21\|psRPS21 of mitochondrial ribosome...	0.03	Archaeplastida
Mp4g21580.1	No alias	component mtRPS21\|psRPS21 of mitochondrial ribosome...	0.18	Archaeplastida
Pp3c20_22830V3.1	No alias	Ribosomal protein S21 family protein	0.1	Archaeplastida
Smo444102	No alias	Protein biosynthesis.organelle translation...	0.05	Archaeplastida
Solyc02g068090.3.1	No alias	component mtRPS21\|psRPS21 of mitochondrial ribosome...	0.1	Archaeplastida
Zm00001e013920_P001	No alias	component mtRPS21\|psRPS21 of mitochondrial ribosome...	0.14	Archaeplastida
Zm00001e025066_P001	No alias	component mtRPS21\|psRPS21 of mitochondrial ribosome...	0.16	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	Neighborhood
BP	GO:0006801	superoxide metabolic process	IEP	Neighborhood
CC	GO:0009521	photosystem	IEP	Neighborhood
CC	GO:0009523	photosystem II	IEP	Neighborhood
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	Neighborhood
MF	GO:0019843	rRNA binding	IEP	Neighborhood
CC	GO:0019898	extrinsic component of membrane	IEP	Neighborhood
BP	GO:0072593	reactive oxygen species metabolic process	IEP	Neighborhood
CC	GO:1990204	oxidoreductase complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001911	Ribosomal_S21	55	109

External Links

No external refs found!

LOC_Os02g09590.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation