LOC_Os02g09790.1

Description : Disease resistance protein RPM1 OS=Arabidopsis thaliana (sp|q39214|rpm1_arath : 348.0)

Gene families : OG0000088 (Archaeplastida) Phylogenetic Tree(s): OG0000088_tree ,
OG_05_0000027 (LandPlants) Phylogenetic Tree(s): OG_05_0000027_tree ,
OG_06_0000027 (SeedPlants) Phylogenetic Tree(s): OG_06_0000027_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os02g09790.1
Cluster	HCCA: Cluster_79

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01024096001	No alias	Putative disease resistance protein At1g59780...	0.03	Archaeplastida
Gb_26463	No alias	Putative disease resistance protein RGA4 OS=Solanum...	0.02	Archaeplastida
LOC_Os08g09430.1	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os11g12350.1	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.04	Archaeplastida
MA_828327g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
Solyc04g025820.1.1	No alias	Disease resistance protein RPP13 OS=Arabidopsis thaliana...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	Neighborhood
MF	GO:0008171	O-methyltransferase activity	IEP	Neighborhood
MF	GO:0010333	terpene synthase activity	IEP	Neighborhood
MF	GO:0016829	lyase activity	IEP	Neighborhood
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Neighborhood
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	177	420
IPR001611	Leu-rich_rpt	602	653

External Links

No external refs found!