1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os02g10540.1

LOC_Os02g10540.1


Description : component mtRPL7/L12 of large ribosomal subunit proteome


Gene families : OG0000950 (Archaeplastida) Phylogenetic Tree(s): OG0000950_tree ,
OG_05_0000673 (LandPlants) Phylogenetic Tree(s): OG_05_0000673_tree ,
OG_06_0000509 (SeedPlants) Phylogenetic Tree(s): OG_06_0000509_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g10540.1
Cluster HCCA: Cluster_318

Target Alias Description ECC score Gene Family Method Actions
AT1G70190 No alias Ribosomal protein L7/L12, oligomerisation;Ribosomal... 0.06 Archaeplastida
AT3G06040 No alias Ribosomal protein L12/ ATP-dependent Clp protease... 0.08 Archaeplastida
AT4G36420 No alias Ribosomal protein L12 family protein 0.06 Archaeplastida
Cpa|evm.model.tig00020704.55 No alias 50S ribosomal protein L12, chloroplastic OS=Spinacia oleracea 0.01 Archaeplastida
Gb_16973 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.06 Archaeplastida
Gb_26365 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.06 Archaeplastida
MA_137800g0010 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.08 Archaeplastida
Mp1g23110.1 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.02 Archaeplastida
Pp3c12_17640V3.1 No alias Ribosomal protein L12 family protein 0.04 Archaeplastida
Pp3c19_21200V3.1 No alias Ribosomal protein L7/L12, oligomerisation;Ribosomal... 0.03 Archaeplastida
Pp3c3_26860V3.1 No alias Ribosomal protein L12 family protein 0.03 Archaeplastida
Smo49023 No alias Protein biosynthesis.organelle translation... 0.02 Archaeplastida
Solyc02g031970.1.1 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.05 Archaeplastida
Solyc02g092300.1.1 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.02 Archaeplastida
Solyc09g010030.3.1 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.04 Archaeplastida
Solyc11g071530.1.1 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.03 Archaeplastida
Zm00001e014041_P002 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e025012_P001 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR013823 Ribosomal_L7/L12_C 126 189
No external refs found!