Coexpression cluster: Cluster_318 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0034645 cellular macromolecule biosynthetic process 17.46% (11/63) 3.99 0.0 0.0
GO:0009059 macromolecule biosynthetic process 17.46% (11/63) 3.87 0.0 0.0
GO:0044249 cellular biosynthetic process 20.63% (13/63) 3.32 0.0 0.0
GO:1901576 organic substance biosynthetic process 20.63% (13/63) 3.25 0.0 0.0
GO:0009058 biosynthetic process 20.63% (13/63) 3.1 0.0 0.0
GO:0044444 cytoplasmic part 15.87% (10/63) 3.6 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 15.87% (10/63) 3.5 0.0 0.0
GO:0006518 peptide metabolic process 12.7% (8/63) 4.11 0.0 0.0
GO:0043603 cellular amide metabolic process 12.7% (8/63) 4.04 0.0 1e-06
GO:0034641 cellular nitrogen compound metabolic process 19.05% (12/63) 2.82 0.0 2e-06
GO:0043229 intracellular organelle 14.29% (9/63) 3.38 0.0 3e-06
GO:0043226 organelle 14.29% (9/63) 3.38 0.0 3e-06
GO:0003735 structural constituent of ribosome 11.11% (7/63) 3.99 0.0 4e-06
GO:0006412 translation 11.11% (7/63) 3.99 0.0 4e-06
GO:0043043 peptide biosynthetic process 11.11% (7/63) 3.96 0.0 4e-06
GO:0043604 amide biosynthetic process 11.11% (7/63) 3.91 0.0 5e-06
GO:0005198 structural molecule activity 11.11% (7/63) 3.89 0.0 5e-06
GO:1990904 ribonucleoprotein complex 11.11% (7/63) 3.9 0.0 5e-06
GO:0044424 intracellular part 17.46% (11/63) 2.63 1e-06 1.3e-05
GO:0042181 ketone biosynthetic process 3.17% (2/63) 9.39 2e-06 1.6e-05
GO:0006743 ubiquinone metabolic process 3.17% (2/63) 9.39 2e-06 1.6e-05
GO:1901663 quinone biosynthetic process 3.17% (2/63) 9.39 2e-06 1.6e-05
GO:1901661 quinone metabolic process 3.17% (2/63) 9.39 2e-06 1.6e-05
GO:0006744 ubiquinone biosynthetic process 3.17% (2/63) 9.39 2e-06 1.6e-05
GO:0044464 cell part 17.46% (11/63) 2.57 2e-06 1.9e-05
GO:0032991 protein-containing complex 14.29% (9/63) 2.87 4e-06 2.5e-05
GO:0005840 ribosome 9.52% (6/63) 3.84 4e-06 2.7e-05
GO:0009987 cellular process 30.16% (19/63) 1.64 5e-06 3.1e-05
GO:0043232 intracellular non-membrane-bounded organelle 9.52% (6/63) 3.69 7e-06 4.5e-05
GO:0043228 non-membrane-bounded organelle 9.52% (6/63) 3.69 7e-06 4.5e-05
GO:0044237 cellular metabolic process 26.98% (17/63) 1.68 1.3e-05 7.1e-05
GO:1901566 organonitrogen compound biosynthetic process 11.11% (7/63) 3.17 1.3e-05 7.3e-05
GO:0044260 cellular macromolecule metabolic process 22.22% (14/63) 1.88 1.8e-05 0.000101
GO:0042180 cellular ketone metabolic process 3.17% (2/63) 7.8 3.3e-05 0.000174
GO:0005575 cellular_component 20.63% (13/63) 1.66 0.000185 0.000951
GO:0097659 nucleic acid-templated transcription 4.76% (3/63) 4.51 0.000318 0.001547
GO:0006351 transcription, DNA-templated 4.76% (3/63) 4.51 0.000318 0.001547
GO:0043170 macromolecule metabolic process 22.22% (14/63) 1.42 0.000546 0.002585
GO:0051186 cofactor metabolic process 4.76% (3/63) 4.18 0.000627 0.002896
GO:0071704 organic substance metabolic process 25.4% (16/63) 1.22 0.000964 0.004234
GO:0032774 RNA biosynthetic process 4.76% (3/63) 3.97 0.000948 0.004268
GO:0006366 transcription by RNA polymerase II 1.59% (1/63) 9.39 0.001493 0.006109
GO:0016556 mRNA modification 1.59% (1/63) 9.39 0.001493 0.006109
GO:0080009 mRNA methylation 1.59% (1/63) 9.39 0.001493 0.006109
GO:0006733 oxidoreduction coenzyme metabolic process 3.17% (2/63) 4.71 0.002669 0.010445
GO:0016070 RNA metabolic process 6.35% (4/63) 2.8 0.002661 0.010645
GO:0006807 nitrogen compound metabolic process 20.63% (13/63) 1.21 0.003367 0.012625
GO:0044267 cellular protein metabolic process 14.29% (9/63) 1.55 0.0033 0.01264
GO:0008199 ferric iron binding 1.59% (1/63) 7.8 0.004473 0.016432
GO:0003676 nucleic acid binding 12.7% (8/63) 1.6 0.004723 0.017002
GO:0009108 coenzyme biosynthetic process 3.17% (2/63) 4.2 0.005387 0.018295
GO:0022607 cellular component assembly 3.17% (2/63) 4.22 0.005244 0.018509
GO:0034654 nucleobase-containing compound biosynthetic process 4.76% (3/63) 3.09 0.005361 0.018556
GO:0008152 metabolic process 26.98% (17/63) 0.91 0.006252 0.02084
GO:0006732 coenzyme metabolic process 3.17% (2/63) 4.03 0.006749 0.022088
GO:0051188 cofactor biosynthetic process 3.17% (2/63) 3.94 0.007566 0.023084
GO:0043227 membrane-bounded organelle 4.76% (3/63) 2.91 0.007525 0.023353
GO:0043231 intracellular membrane-bounded organelle 4.76% (3/63) 2.91 0.007525 0.023353
GO:0016272 prefoldin complex 1.59% (1/63) 7.07 0.007444 0.023929
GO:0006465 signal peptide processing 1.59% (1/63) 6.8 0.008927 0.025917
GO:0005787 signal peptidase complex 1.59% (1/63) 6.8 0.008927 0.025917
GO:0032040 small-subunit processome 1.59% (1/63) 6.8 0.008927 0.025917
GO:0018130 heterocycle biosynthetic process 4.76% (3/63) 2.81 0.009072 0.02592
GO:0019438 aromatic compound biosynthetic process 4.76% (3/63) 2.8 0.009332 0.026247
GO:0030684 preribosome 1.59% (1/63) 6.39 0.011885 0.03193
GO:0001510 RNA methylation 1.59% (1/63) 6.39 0.011885 0.03193
GO:0008150 biological_process 33.33% (21/63) 0.7 0.012168 0.032209
GO:1901362 organic cyclic compound biosynthetic process 4.76% (3/63) 2.65 0.012379 0.032292
GO:0090304 nucleic acid metabolic process 6.35% (4/63) 2.18 0.011772 0.032599
GO:1905368 peptidase complex 1.59% (1/63) 6.22 0.013361 0.034356
GO:0044238 primary metabolic process 20.63% (13/63) 0.96 0.01357 0.034404
GO:0005739 mitochondrion 1.59% (1/63) 6.07 0.014834 0.036578
GO:0005759 mitochondrial matrix 1.59% (1/63) 6.07 0.014834 0.036578
GO:0006414 translational elongation 1.59% (1/63) 5.93 0.016306 0.039663
GO:0070013 intracellular organelle lumen 1.59% (1/63) 5.8 0.017775 0.040501
GO:0031163 metallo-sulfur cluster assembly 1.59% (1/63) 5.8 0.017775 0.040501
GO:0031974 membrane-enclosed lumen 1.59% (1/63) 5.8 0.017775 0.040501
GO:0016226 iron-sulfur cluster assembly 1.59% (1/63) 5.8 0.017775 0.040501
GO:0043233 organelle lumen 1.59% (1/63) 5.8 0.017775 0.040501
GO:0005783 endoplasmic reticulum 1.59% (1/63) 5.48 0.02217 0.049883
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_39 0.042 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_53 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_75 0.031 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_91 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_134 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_172 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_194 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_207 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_242 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_50 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_164 0.035 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_196 0.026 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_210 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_229 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_245 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_29 0.025 Archaeplastida Compare
Gingko biloba HCCA Cluster_46 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_265 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_335 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_43 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_86 0.036 Archaeplastida Compare
Zea mays HCCA Cluster_252 0.037 Archaeplastida Compare
Zea mays HCCA Cluster_261 0.033 Archaeplastida Compare
Zea mays HCCA Cluster_275 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_276 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_304 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_309 0.025 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_36 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_110 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_121 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_155 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_185 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_239 0.044 Archaeplastida Compare
Picea abies HCCA Cluster_470 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_486 0.029 Archaeplastida Compare
Picea abies HCCA Cluster_488 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_120 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_140 0.029 Archaeplastida Compare
Oryza sativa HCCA Cluster_333 0.025 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_113 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_8 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_86 0.031 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_105 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_123 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_270 0.029 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_273 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_274 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_283 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_16 0.028 Archaeplastida Compare
Vitis vinifera HCCA Cluster_35 0.027 Archaeplastida Compare
Vitis vinifera HCCA Cluster_119 0.035 Archaeplastida Compare
Vitis vinifera HCCA Cluster_168 0.023 Archaeplastida Compare
Sequences (63) (download table)

InterPro Domains

GO Terms

Family Terms