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  5. LOC_Os02g11040.1

LOC_Os02g11040.1


Description : no hits & (original description: none)


Gene families : OG0000610 (Archaeplastida) Phylogenetic Tree(s): OG0000610_tree ,
OG_05_0002309 (LandPlants) Phylogenetic Tree(s): OG_05_0002309_tree ,
OG_06_0001279 (SeedPlants) Phylogenetic Tree(s): OG_06_0001279_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g11040.1
Cluster HCCA: Cluster_311

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00042p00185900 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00141p00087190 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT1G29980 No alias Protein of unknown function, DUF642 0.03 Archaeplastida
AT2G41800 No alias Protein of unknown function, DUF642 0.06 Archaeplastida
AT2G41810 No alias Protein of unknown function, DUF642 0.02 Archaeplastida
AT5G11420 No alias Protein of unknown function, DUF642 0.03 Archaeplastida
Gb_04470 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g59300.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g10620.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10434741g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10435058g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_201516g0020 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_251322g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_44504g0020 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_89188g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_9589g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc02g070540.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc03g120040.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc04g015610.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc08g067030.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc12g042930.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e006089_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e007711_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e007714_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e019773_P002 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006417 regulation of translation IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
BP GO:0017148 negative regulation of translation IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
MF GO:0030597 RNA glycosylase activity IEP Neighborhood
MF GO:0030598 rRNA N-glycosylase activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0034248 regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051248 negative regulation of protein metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140102 catalytic activity, acting on a rRNA IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006946 DUF642 30 187
IPR006946 DUF642 198 366
No external refs found!