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  5. LOC_Os02g11840.1

LOC_Os02g11840.1


Description : subunit beta2 of coat protein complex


Gene families : OG0002594 (Archaeplastida) Phylogenetic Tree(s): OG0002594_tree ,
OG_05_0002769 (LandPlants) Phylogenetic Tree(s): OG_05_0002769_tree ,
OG_06_0002542 (SeedPlants) Phylogenetic Tree(s): OG_06_0002542_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g11840.1
Cluster HCCA: Cluster_215

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00142p00013680 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.09 Archaeplastida
AT1G79990 No alias structural molecules 0.07 Archaeplastida
AT3G15980 No alias Coatomer, beta' subunit 0.14 Archaeplastida
Cpa|evm.model.tig00020903.33 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
Cre02.g118500 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.07 Archaeplastida
GSVIVT01017121001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 Archaeplastida
Gb_26317 No alias subunit beta2 of coat protein complex 0.03 Archaeplastida
Mp3g04060.1 No alias subunit beta2 of coat protein complex 0.03 Archaeplastida
Pp3c11_8520V3.1 No alias Coatomer, beta\ subunit 0.04 Archaeplastida
Pp3c14_8280V3.1 No alias Coatomer, beta\ subunit 0.08 Archaeplastida
Pp3c2_1810V3.1 No alias Coatomer, beta\ subunit 0.02 Archaeplastida
Solyc03g120270.4.1 No alias subunit beta2 of coat protein complex 0.08 Archaeplastida
Solyc06g066730.3.1 No alias subunit beta2 of coat protein complex 0.04 Archaeplastida
Solyc12g043000.3.1 No alias subunit beta2 of coat protein complex 0.08 Archaeplastida
Zm00001e014494_P001 No alias subunit beta2 of coat protein complex 0.1 Archaeplastida
Zm00001e024969_P001 No alias subunit beta2 of coat protein complex 0.1 Archaeplastida
Zm00001e030001_P002 No alias subunit beta2 of coat protein complex 0.07 Archaeplastida
Zm00001e036524_P002 No alias subunit beta2 of coat protein complex 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
BP GO:0016482 cytosolic transport IEP Neighborhood
CC GO:0017119 Golgi transport complex IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
CC GO:0030119 AP-type membrane coat adaptor complex IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030126 COPI vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
CC GO:0030131 clathrin adaptor complex IEP Neighborhood
CC GO:0030906 retromer, cargo-selective complex IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0042147 retrograde transport, endosome to Golgi IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR006692 Coatomer_WD-assoc_reg 24 468
No external refs found!