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  5. LOC_Os02g15080.1

LOC_Os02g15080.1


Description : RING-H2-class E3 ligase


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000003 (LandPlants) Phylogenetic Tree(s): OG_05_0000003_tree ,
OG_06_0000056 (SeedPlants) Phylogenetic Tree(s): OG_06_0000056_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g15080.1
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00152p00054630 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AT2G17730 NIP2 NEP-interacting protein 2 0.03 Archaeplastida
AT4G10160 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT4G35840 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G07040 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Cpa|evm.model.tig00000792.59 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
GSVIVT01009096001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01027769001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
LOC_Os02g15100.1 No alias RING-H2 finger protein ATL40 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10145129g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp4g04600.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c17_13190V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Solyc08g081370.1.1 No alias E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis... 0.02 Archaeplastida
Solyc11g005280.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0016042 lipid catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 120 163
No external refs found!