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  5. LOC_Os02g15760.1

LOC_Os02g15760.1


Description : transcription factor (bHLH)


Gene families : OG0000509 (Archaeplastida) Phylogenetic Tree(s): OG0000509_tree ,
OG_05_0000283 (LandPlants) Phylogenetic Tree(s): OG_05_0000283_tree ,
OG_06_0003516 (SeedPlants) Phylogenetic Tree(s): OG_06_0003516_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g15760.1
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00015p00239460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AT1G22490 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 Archaeplastida
AT3G06120 MUTE basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
GSVIVT01003437001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
GSVIVT01021074001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
LOC_Os03g08930.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
LOC_Os08g37730.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os09g29360.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os10g23050.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
MA_120602g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_130776g0010 No alias transcription factor (bHLH) 0.06 Archaeplastida
MA_57244g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_686524g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc01g080050.4.1 No alias transcription factor (bHLH) 0.08 Archaeplastida
Solyc01g098720.3.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
Solyc05g053660.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc09g091760.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e000161_P002 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e009989_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e014279_P001 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e015494_P002 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e023271_P001 No alias transcription factor (bHLH) 0.06 Archaeplastida
Zm00001e023838_P003 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e024824_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e026643_P001 No alias transcription factor (bHLH) 0.07 Archaeplastida
Zm00001e026696_P001 No alias transcription factor (bHLH) 0.06 Archaeplastida
Zm00001e034422_P002 No alias transcription factor (bHLH) 0.06 Archaeplastida
Zm00001e037075_P001 No alias transcription factor (bHLH) 0.08 Archaeplastida
Zm00001e041403_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 131 181
No external refs found!