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  5. AMTR_s00002p00268070

AMTR_s00002p00268070 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.532

Description : Amino acid metabolism.biosynthesis.shikimate family.tryptophan.tryptophan synthase complex.alpha subunit


Gene families : OG0002740 (Archaeplastida) Phylogenetic Tree(s): OG0002740_tree ,
OG_05_0002351 (LandPlants) Phylogenetic Tree(s): OG_05_0002351_tree ,
OG_06_0001999 (SeedPlants) Phylogenetic Tree(s): OG_06_0001999_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00268070
Cluster HCCA: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
Cre12.g528700 No alias Amino acid metabolism.biosynthesis.shikimate... 0.02 Archaeplastida
LOC_Os03g58320.1 No alias subunit alpha of tryptophan synthase complex 0.02 Archaeplastida
Solyc01g098550.3.1 No alias subunit alpha of tryptophan synthase complex 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004834 tryptophan synthase activity IEA Interproscan
BP GO:0006568 tryptophan metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
InterPro domains Description Start Stop
IPR002028 Trp_synthase_suA 52 307
No external refs found!