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  5. LOC_Os02g25940.1

LOC_Os02g25940.1


Description : histone (H3)


Gene families : OG0000119 (Archaeplastida) Phylogenetic Tree(s): OG0000119_tree ,
OG_05_0000124 (LandPlants) Phylogenetic Tree(s): OG_05_0000124_tree ,
OG_06_0000125 (SeedPlants) Phylogenetic Tree(s): OG_06_0000125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g25940.1
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00168390 No alias Histone H3.2 OS=Pisum sativum 0.02 Archaeplastida
LOC_Os06g06460.1 No alias histone (H3) 0.04 Archaeplastida
LOC_Os06g06480.1 No alias histone (H3) 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 8 111
No external refs found!