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  5. LOC_Os02g27060.1

LOC_Os02g27060.1


Description : High mobility group B protein 15 OS=Arabidopsis thaliana (sp|q9mat6|hmg15_arath : 260.0)


Gene families : OG0000729 (Archaeplastida) Phylogenetic Tree(s): OG0000729_tree ,
OG_05_0001078 (LandPlants) Phylogenetic Tree(s): OG_05_0001078_tree ,
OG_06_0000935 (SeedPlants) Phylogenetic Tree(s): OG_06_0000935_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g27060.1
Cluster HCCA: Cluster_243


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006865 amino acid transport IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0098656 anion transmembrane transport IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:1903825 organic acid transmembrane transport IEP Neighborhood
BP GO:1905039 carboxylic acid transmembrane transport IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR009071 HMG_box_dom 286 353
IPR001606 ARID_dom 81 162
No external refs found!